RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 LRRC40Q9H9A6 602 aa13.71□□□□□ -0.21
COMMD4-201ENST00000267935 INTS7Q9NVH2 962 aaKnown RBP13.71□□□□□ -0.21
COMMD4-201ENST00000267935 ERRFI1Q9UJM3 462 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-201ENST00000267935 ICKQ9UPZ9 632 aa13.71□□□□□ -0.21
COMMD4-201ENST00000267935 TEX15Q9BXT5 2789 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 AGPSO00116 658 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 CCL22O00626 93 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 PJA2O43164 708 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 IPO7O95373 1038 aaKnown RBP13.7□□□□□ -0.22
COMMD4-201ENST00000267935 RPN2P04844 631 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 TPH1P17752 444 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 ITGAXP20702 1163 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 ITGA3P26006 1051 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 CTNNA1P35221 906 aaKnown RBP13.7□□□□□ -0.22
COMMD4-201ENST00000267935 PTPN7P35236 360 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 MARCKSL1P49006 195 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 OLIG2Q13516 323 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 BRD3Q15059 726 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 ZNF658BQ4V348 819 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-201ENST00000267935 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 Q6ZS92 163 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 LINC00523Q86TU6 105 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 TRIM73Q86UV7 250 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 SLC34A3Q8N130 599 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 DNAJC22Q8N4W6 341 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 OR5K2Q8NHB8 316 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 AGAP4Q96P64 663 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 GORASP1Q9BQQ3 440 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 TSSK1BQ9BXA7 367 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 IL1RAPL1Q9NZN1 696 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-201ENST00000267935 DHCR7Q9UBM7 475 aaKnown RBP13.7□□□□□ -0.22
COMMD4-201ENST00000267935 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
COMMD4-201ENST00000267935 HIVEP3Q5T1R4 2406 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 ALBP02768 609 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 ACADLP28330 430 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 DCTP40126 519 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 DBN1Q16643 649 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 P3H1Q32P28 736 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 DNAJC21Q5F1R6 531 aaKnown RBP13.69□□□□□ -0.22
COMMD4-201ENST00000267935 ZC3H12BQ5HYM0 836 aaKnown RBP13.69□□□□□ -0.22
COMMD4-201ENST00000267935 YOD1Q5VVQ6 348 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-201ENST00000267935 MRPL14Q6P1L8 145 aaKnown RBP13.69□□□□□ -0.22
COMMD4-201ENST00000267935 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 EURLQ9NYK6 297 aa13.69□□□□□ -0.22
COMMD4-201ENST00000267935 RNF224P0DH78 156 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 MMP11P24347 488 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 MSNP26038 577 aaKnown RBP13.68□□□□□ -0.22
COMMD4-201ENST00000267935 COL8A1P27658 744 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 GABRA4P48169 554 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 POU6F1Q14863 301 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 ZIC1Q15915 447 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 DEFB110Q30KQ9 67 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 FAM214AQ32MH5 1076 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 TCTE1Q5JU00 501 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 ZNF787Q6DD87 383 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 PACS1Q6VY07 963 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 OVCH1Q7RTY7 1134 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 PPP1R32Q7Z5V6 425 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 MCATQ8IVS2 390 aaKnown RBP13.68□□□□□ -0.22
COMMD4-201ENST00000267935 ST6GALNAC3Q8NDV1 305 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 GSDMBQ8TAX9 411 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 UBE2Q2Q8WVN8 375 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 FKBP10Q96AY3 582 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 NRTNQ99748 197 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 WDR77Q9BQA1 342 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-201ENST00000267935 EPS8L2Q9H6S3 715 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 MRM3Q9HC36 420 aaKnown RBP13.68□□□□□ -0.22
COMMD4-201ENST00000267935 SPHK1Q9NYA1 384 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 CDC23Q9UJX2 597 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 NXT1Q9UKK6 140 aaKnown RBP13.68□□□□□ -0.22
COMMD4-201ENST00000267935 ANKRD12Q6UB98 2062 aa13.68□□□□□ -0.22
COMMD4-201ENST00000267935 PRRC2CQ9Y520 2896 aaKnown RBP13.68□□□□□ -0.22
COMMD4-201ENST00000267935 A0A1B0GX78 115 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 SLC5A10A0PJK1 596 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 H3BMH7 237 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 CLDN1O95832 211 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 RAB28P51157 221 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-201ENST00000267935 GRM7Q14831 915 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 SLC9A5Q14940 896 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 TTLL10Q6ZVT0 673 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 KLHDC8BQ8IXV7 354 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 PIANPQ8IYJ0 282 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 RAB42Q8N4Z0 105 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 DNAAF3Q8N9W5 541 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 TTC29Q8NA56 475 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-201ENST00000267935 PPP4R1Q8TF05 950 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 ASZ1Q8WWH4 475 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 MRFAP1L1Q96HT8 127 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 BARD1Q99728 777 aaKnown RBP13.67□□□□□ -0.22
COMMD4-201ENST00000267935 FAM118BQ9BPY3 351 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 TSPY26PQ9H489 355 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 WDR54Q9H977 334 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 PCDHGA10Q9Y5H3 936 aa13.67□□□□□ -0.22
COMMD4-201ENST00000267935 CNTRLQ7Z7A1 2325 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms