RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 RAET1GQ6H3X3 334 aa16.27■□□□□ 0.19
SCAP-201ENST00000265565 HDDC2Q7Z4H3 204 aa16.27■□□□□ 0.19
SCAP-201ENST00000265565 IMP4Q96G21 291 aaKnown RBP16.27■□□□□ 0.19
SCAP-201ENST00000265565 PKD1L3Q7Z443 1732 aa16.27■□□□□ 0.19
SCAP-201ENST00000265565 DOT1LQ8TEK3 1739 aa16.27■□□□□ 0.19
SCAP-201ENST00000265565 SERPINB7O75635 380 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 C9P02748 559 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 GABRR2P28476 465 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 ASMTP46597 345 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 FBXW4P57775 412 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 SRSF11Q05519 484 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 SNAPC1Q16533 368 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 TPRG1LQ5T0D9 272 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 PRSS55Q6UWB4 352 aaPredicted RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 PYURFQ96I23 114 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 SLC38A2Q96QD8 506 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 ENTPD4Q9Y227 616 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 PCDHGB3Q9Y5G1 929 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 CEPT1Q9Y6K0 416 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 KNL1Q8NG31 2342 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 PRSS51A0A1B0GVH4 220 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 OXTRP30559 389 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 FOXA1P55317 472 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 SMIM11AP58511 58 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 RPS3AP61247 264 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 SCN1BQ07699 218 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 MFSD4BQ5TF39 518 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 C11orf88Q6PI97 169 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 RD3Q7Z3Z2 195 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 RAVER1Q8IY67 606 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 GAB3Q8WWW8 586 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 HDAC2Q92769 488 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 RANBP9Q96S59 729 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 CORO1BQ9BR76 489 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 CLEC4AQ9UMR7 237 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 EIF2S1P05198 315 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 RPL3P39023 403 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 GPR1P46091 355 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 SMARCB1Q12824 385 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 STX4Q12846 297 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 RANBP10Q6VN20 620 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 ZNF598Q86UK7 904 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 OR10G2Q8NGC3 310 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 MYRFLQ96LU7 910 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 ZNF597Q96LX8 424 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 MCMBPQ9BTE3 642 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 FUNDC2Q9BWH2 189 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 AIG1Q9NVV5 245 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 FLT3LGP49771 235 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 OR2B6P58173 313 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 TYSND1Q2T9J0 566 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 IFI44LQ53G44 452 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 MZT2AQ6P582 158 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 UBE2E3Q969T4 207 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 LRCH3Q96II8 777 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 C8orf48Q96LL4 319 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 TEFMQ96QE5 360 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 SP140LQ9H930 580 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 MRM3Q9HC36 420 aaKnown RBP16.26■□□□□ 0.19
SCAP-201ENST00000265565 ERVK-18Q9QC07 812 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 SLC22A14Q9Y267 594 aa16.26■□□□□ 0.19
SCAP-201ENST00000265565 H0YAE9 185 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 HAS3O00219 553 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 SAP18O00422 153 aaKnown RBP16.25■□□□□ 0.19
SCAP-201ENST00000265565 EFCAB14O75071 495 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 GADD45GO95257 159 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 MYF6P23409 242 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 ZNF404Q494X3 552 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 ZNF607Q96SK3 696 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 POLR2J2Q9GZM3 115 aaKnown RBP16.25■□□□□ 0.19
SCAP-201ENST00000265565 CFAP97Q9P2B7 532 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 SNAI1O95863 264 aaPredicted RBP16.25■□□□□ 0.19
SCAP-201ENST00000265565 NTSP30990 170 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 RNASE12Q5GAN4 147 aaKnown RBP16.25■□□□□ 0.19
SCAP-201ENST00000265565 FUT10Q6P4F1 479 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 TCAIMQ8N3R3 496 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 QRFPRQ96P65 431 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 ZNF347Q96SE7 839 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 NKIRAS2Q9NYR9 191 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 WDR37Q9Y2I8 494 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 H3BM21 787 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
SCAP-201ENST00000265565 HTR1EP28566 365 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 IL18Q14116 193 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 KLHL12Q53G59 568 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 PAGE3Q5JUK9 113 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 CAPN13Q6MZZ7 669 aaPredicted RBP16.25■□□□□ 0.19
SCAP-201ENST00000265565 USP43Q70EL4 1123 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 LGI4Q8N135 537 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 KRTCAP2Q8N6L1 136 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 FUBP3Q96I24 572 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCAP-201ENST00000265565 C3orf30Q96M34 536 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 ZNF641Q96N77 438 aaPredicted RBP16.25■□□□□ 0.19
SCAP-201ENST00000265565 SEMA3GQ9NS98 782 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 IGSF5Q9NSI5 407 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 FAIMQ9NVQ4 179 aa16.25■□□□□ 0.19
SCAP-201ENST00000265565 MRPL39Q9NYK5 338 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms