RNA–Protein interactions for RNA: ENST00000264263.9

GFM1-201, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5 BASIC

Gene GFM1, Length 3,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-201ENST00000264263 CD52P31358 61 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 CSRP3P50461 194 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 DEFA1P59665 94 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 DEFA3P59666 94 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 TIAL1Q01085 375 aaKnown RBP eCLIP11.3□□□□□ -0.6
GFM1-201ENST00000264263 COL9A2Q14055 689 aaPredicted RBP11.3□□□□□ -0.6
GFM1-201ENST00000264263 DUSP28Q4G0W2 176 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 MS4A13Q5J8X5 152 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
GFM1-201ENST00000264263 DLEU7Q6UYE1 221 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 USP51Q70EK9 711 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 ZFAND4Q86XD8 727 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 DCP2Q8IU60 420 aaKnown RBP11.3□□□□□ -0.6
GFM1-201ENST00000264263 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 ASCC1Q8N9N2 400 aaKnown RBP11.3□□□□□ -0.6
GFM1-201ENST00000264263 SPPL2AQ8TCT8 520 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 ADAMTS16Q8TE57 1224 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 FBXO32Q969P5 355 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 EGLN2Q96KS0 407 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 ASB2Q96Q27 587 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 TINF2Q9BSI4 451 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 TFB2MQ9H5Q4 396 aaKnown RBP11.3□□□□□ -0.6
GFM1-201ENST00000264263 TAS2R16Q9NYV7 291 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 INTS6Q9UL03 887 aaKnown RBP11.3□□□□□ -0.6
GFM1-201ENST00000264263 TPRKBQ9Y3C4 175 aa11.3□□□□□ -0.6
GFM1-201ENST00000264263 RGS10O43665 173 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 MMP2P08253 660 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 FGF4P08620 206 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 KCNE1P15382 129 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ITIH1P19827 911 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 RPL34P49207 117 aaKnown RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 PSEN2P49810 448 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 GTF2H2Q13888 395 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 SPANXN2Q5MJ10 180 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 GTF2H2CQ6P1K8 395 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 B3GNT8Q7Z7M8 397 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ELMOD2Q8IZ81 293 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 TUBA1CQ9BQE3 449 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 GPN2Q9H9Y4 310 aaPredicted RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 KRT84Q9NSB2 600 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 OGDHLQ9ULD0 1010 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 DYRK3O43781 588 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ULK1O75385 1050 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 PGRP06401 933 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ALPIP09923 528 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ATXN1LP0C7T5 689 aaKnown RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 GGT1P19440 569 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 PBX3P40426 434 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 GRSF1Q12849 480 aaKnown RBP eCLIP11.29□□□□□ -0.6
GFM1-201ENST00000264263 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 PWP1Q13610 501 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 GOLGA7Q7Z5G4 137 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 AP5M1Q9H0R1 490 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 MARCH2Q9P0N8 246 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 NOD1Q9Y239 953 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 KLHL20Q9Y2M5 609 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 WBP11Q9Y2W2 641 aaKnown RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 SPEF1Q9Y4P9 236 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 PCDHB9Q9Y5E1 797 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ZNF831Q5JPB2 1677 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ANK1P16157 1881 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 TYW5A2RUC4 315 aaKnown RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 LOC110117498-PIK3R3F6TDL0 507 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 KCNK2O95069 426 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 DDX5P17844 614 aaKnown RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 BMPR1AP36894 532 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 THPOP40225 353 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 CASP3P42574 277 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 CCL23P55773 120 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 ISL1P61371 349 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 MVKQ03426 396 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 MXD1Q05195 221 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 CCL14Q16627 93 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 HIST2H2ACQ16777 129 aaPredicted RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 CARD16Q5EG05 197 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 WDR45BQ5MNZ6 344 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 TPRG1LQ5T0D9 272 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.29□□□□□ -0.6
GFM1-201ENST00000264263 CYP2U1Q7Z449 544 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 C7orf57Q8NEG2 295 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 OR6Q1Q8NGQ2 317 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 NPLOC4Q8TAT6 608 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 FKBP10Q96AY3 582 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 APOLD1Q96LR9 279 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 CIPCQ9C0C6 399 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 HOXD1Q9GZZ0 328 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 B3GNT3Q9Y2A9 372 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 TESMINQ9Y4I5 508 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 PTCH2Q9Y6C5 1203 aa11.29□□□□□ -0.6
GFM1-201ENST00000264263 FAM92AA1XBS5 289 aa11.28□□□□□ -0.6
GFM1-201ENST00000264263 VPS4BO75351 444 aa11.28□□□□□ -0.6
GFM1-201ENST00000264263 TULP3O75386 442 aa11.28□□□□□ -0.6
GFM1-201ENST00000264263 MED26O95402 600 aa11.28□□□□□ -0.6
GFM1-201ENST00000264263 MSH3P20585 1137 aa11.28□□□□□ -0.6
GFM1-201ENST00000264263 WEE1P30291 646 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms