RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CHST8Q9H2A9 424 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 A0A0J9YY10 115 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 CDC14CA4D256 554 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 SDR42E2A6NKP2 422 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 PFDN6O15212 129 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 SUV39H1O43463 412 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 TMEM63AO94886 807 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 CYP2A7P20853 494 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 CD9P21926 228 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 PKLRP30613 574 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 RORAP35398 523 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 GABRA4P48169 554 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 RAB28P51157 221 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 EIF3BP55884 814 aaKnown RBP15.52■□□□□ 0.08
USE1-201ENST00000263897 ITGA1P56199 1179 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 GRB7Q14451 532 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 SLC5A12Q1EHB4 618 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 TYSND1Q2T9J0 566 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 IZUMO3Q5VZ72 239 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 LCN10Q6JVE6 187 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 OTOAQ7RTW8 1153 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 DCUN1D3Q8IWE4 304 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 OTUD6BQ8N6M0 293 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 C19orf47Q8N9M1 422 aaKnown RBP15.52■□□□□ 0.08
USE1-201ENST00000263897 GSDMBQ8TAX9 411 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 SEC14L1Q92503 715 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 LPGAT1Q92604 370 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 ABHD17AQ96GS6 310 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 ACTR5Q9H9F9 607 aaPredicted RBP15.52■□□□□ 0.08
USE1-201ENST00000263897 XAB2Q9HCS7 855 aaKnown RBP15.52■□□□□ 0.08
USE1-201ENST00000263897 PCMTD2Q9NV79 361 aa15.52■□□□□ 0.08
USE1-201ENST00000263897 FAM237BA0A1B0GVD1 139 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 E7EQ34 232 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 ZNF749O43361 778 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 RAB40ALP0C0E4 278 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 PAMP19021 973 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 PEBP1P30086 187 aaKnown RBP15.51■□□□□ 0.07
USE1-201ENST00000263897 FMO4P31512 558 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 ADARP55265 1226 aaKnown RBP15.51■□□□□ 0.07
USE1-201ENST00000263897 RPS18P62269 152 aaKnown RBP15.51■□□□□ 0.07
USE1-201ENST00000263897 ANKRD20A4Q4UJ75 823 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 CTSL3PQ5NE16 218 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 RNF187Q5TA31 235 aaPredicted RBP15.51■□□□□ 0.07
USE1-201ENST00000263897 NEPROQ6NW34 567 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 CASC4Q6P4E1 433 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 TTC23LQ6PF05 361 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 PRICKLE2Q7Z3G6 844 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 SYVN1Q86TM6 617 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 TMEM135Q86UB9 458 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 GPR135Q8IZ08 494 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 LINC01555Q8NAE3 123 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 C9orf43Q8TAL5 461 aaPredicted RBP15.51■□□□□ 0.07
USE1-201ENST00000263897 N4BP2L2Q92802 583 aaPredicted RBP15.51■□□□□ 0.07
USE1-201ENST00000263897 KCNF1Q9H3M0 494 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 TRMT1Q9NXH9 659 aaKnown RBP15.51■□□□□ 0.07
USE1-201ENST00000263897 SAMD15Q9P1V8 674 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 BOD1L1Q8NFC6 3051 aa15.51■□□□□ 0.07
USE1-201ENST00000263897 H3BMH7 237 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 H3BMM5 538 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 GOLGA8MH3BSY2 632 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 CES2O00748 559 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 HCRTR1O43613 425 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 KIF5CO60282 957 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 PHF2O75151 1096 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 OR2B3O76000 313 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 ESR1P03372 595 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 CAPN1P07384 714 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 HBQ1P09105 142 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 OGNP20774 298 aaKnown RBP15.5■□□□□ 0.07
USE1-201ENST00000263897 FNTAP49354 379 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 DHX34Q14147 1143 aaKnown RBP15.5■□□□□ 0.07
USE1-201ENST00000263897 UGT8Q16880 541 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 ATG14Q6ZNE5 492 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 CENPUQ71F23 418 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 CILP2Q8IUL8 1156 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 DNAJC22Q8N4W6 341 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 C2orf73Q8N5S3 287 aaPredicted RBP15.5■□□□□ 0.07
USE1-201ENST00000263897 LMNTD1Q8N9Z9 388 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 OR2L8Q8NGY9 312 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 GRK7Q8WTQ7 553 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 RAD51AP1Q96B01 352 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 SLC22A18Q96BI1 424 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 SERPINB12Q96P63 405 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 IL17FQ96PD4 163 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 DPH2Q9BQC3 489 aaPredicted RBP15.5■□□□□ 0.07
USE1-201ENST00000263897 TRIM56Q9BRZ2 755 aaKnown RBP15.5■□□□□ 0.07
USE1-201ENST00000263897 NLNQ9BYT8 704 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 SLC7A5P2Q9GIP4 190 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 SPRTNQ9H040 489 aaPredicted RBP15.5■□□□□ 0.07
USE1-201ENST00000263897 ZNF71Q9NQZ8 489 aaPredicted RBP15.5■□□□□ 0.07
USE1-201ENST00000263897 CIDEBQ9UHD4 219 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 SLC39A10Q9ULF5 831 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 SNX12Q9UMY4 172 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 CRYL1Q9Y2S2 319 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 MRFAP1Q9Y605 127 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 NFS1Q9Y697 457 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 AP1M2Q9Y6Q5 423 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 MED13Q9UHV7 2174 aa15.5■□□□□ 0.07
USE1-201ENST00000263897 RASGRF2O14827 1237 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 ZNF185O15231 689 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms