RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 AGTRAPQ6RW13 159 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 ABRAXAS1Q6UWZ7 409 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 C11orf74Q86VG3 221 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 TBC1D21Q8IYX1 336 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 CACNA2D3Q8IZS8 1091 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 CCDC197Q8NCU1 140 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 RAD51AP1Q96B01 352 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 TRIT1Q9H3H1 467 aaKnown RBP22.06■■□□□ 1.12
UFD1-201ENST00000263202 SCHIP1Q9P0W5 487 aaPredicted RBP22.06■■□□□ 1.12
UFD1-201ENST00000263202 USH1CQ9Y6N9 552 aa22.06■■□□□ 1.12
UFD1-201ENST00000263202 ZNF195O14628 629 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 GPR37L1O60883 481 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 ITPKAP23677 461 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 BLKP51451 505 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 HK2P52789 917 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 ILF3Q12906 894 aaKnown RBP eCLIP22.05■■□□□ 1.12
UFD1-201ENST00000263202 RBBP7Q16576 425 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 LRRC70Q7Z2Q7 622 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 ZNF480Q8WV37 535 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 PYCR2Q96C36 320 aa22.05■■□□□ 1.12
UFD1-201ENST00000263202 NOL11Q9H8H0 719 aaKnown RBP22.05■■□□□ 1.12
UFD1-201ENST00000263202 A0A0G2JND7 137 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 OR52A4PA6NMU1 304 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 TMEM233B4DJY2 109 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 MATN2O00339 956 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 OR7A17O14581 309 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 BCAT2O15382 392 aaPredicted RBP22.04■■□□□ 1.12
UFD1-201ENST00000263202 ALOX15P16050 662 aaPredicted RBP22.04■■□□□ 1.12
UFD1-201ENST00000263202 AQP5P55064 265 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 PRKG2Q13237 762 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 RPE65Q16518 533 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 MAVSQ7Z434 540 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 KLHDC8AQ8IYD2 350 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 FERD3LQ96RJ6 166 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 ZNF382Q96SR6 550 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 SIKE1Q9BRV8 207 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 IPPKQ9H8X2 491 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 IMP3Q9NV31 184 aaKnown RBP22.04■■□□□ 1.12
UFD1-201ENST00000263202 DNAJC28Q9NX36 388 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 ZNF225Q9UK10 706 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 TDRKHQ9Y2W6 561 aaKnown RBP22.04■■□□□ 1.12
UFD1-201ENST00000263202 ARL2BPQ9Y2Y0 163 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 ANGPTL3Q9Y5C1 460 aa22.04■■□□□ 1.12
UFD1-201ENST00000263202 A6NCN8 305 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 VILLO15195 856 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 HRO43593 1189 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 WDR47O94967 919 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 CSF2P04141 144 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 FGF4P08620 206 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 JUNDP17535 347 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 PRDX3P30048 256 aaKnown RBP22.03■■□□□ 1.12
UFD1-201ENST00000263202 HALP42357 657 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 CSNK1EP49674 416 aaKnown RBP22.03■■□□□ 1.12
UFD1-201ENST00000263202 NXPH1P58417 271 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 LYSMD4Q5XG99 296 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 SYVN1Q86TM6 617 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 PPFIBP2Q8ND30 876 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 OR52B6Q8NGF0 335 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 OR56A3Q8NH54 315 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 NELL1Q92832 810 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 SKA1Q96BD8 255 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 TMEM120AQ9BXJ8 343 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 GSDMCQ9BYG8 508 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 KCNK4Q9NYG8 393 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 APOBEC3BQ9UH17 382 aaKnown RBP22.03■■□□□ 1.12
UFD1-201ENST00000263202 SLC22A14Q9Y267 594 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 TRAF6Q9Y4K3 522 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 SPAG17Q6Q759 2223 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 ESRRBO95718 433 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 CTSEP14091 401 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 EPB42P16452 691 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 PIK3CGP48736 1102 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 DHPSP49366 369 aaPredicted RBP22.03■■□□□ 1.12
UFD1-201ENST00000263202 AFF3P51826 1226 aaKnown RBP22.03■■□□□ 1.12
UFD1-201ENST00000263202 ARFIP2P53365 341 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 NAE1Q13564 534 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 INTS7Q9NVH2 962 aaKnown RBP22.03■■□□□ 1.12
UFD1-201ENST00000263202 PLAGL1Q9UM63 463 aa22.03■■□□□ 1.12
UFD1-201ENST00000263202 ARHGEF17Q96PE2 2063 aaPredicted RBP22.03■■□□□ 1.12
UFD1-201ENST00000263202 SLCO1B7G3V0H7 640 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 CELA2BP08218 269 aaPredicted RBP22.02■■□□□ 1.12
UFD1-201ENST00000263202 MTHFD1P11586 935 aaKnown RBP22.02■■□□□ 1.12
UFD1-201ENST00000263202 NME1P15531 152 aaKnown RBP22.02■■□□□ 1.12
UFD1-201ENST00000263202 EPORP19235 508 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 PKNOX1P55347 436 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 PLK5Q496M5 336 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 FAM219BQ5XKK7 198 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 CLEC6AQ6EIG7 209 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 GPRIN3Q6ZVF9 776 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 KIRREL3Q8IZU9 778 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 MENTQ9BUN1 341 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 MVB12BQ9H7P6 319 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 DNAJC11Q9NVH1 559 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 VTI1BQ9UEU0 232 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 STK38LQ9Y2H1 464 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 FIS1Q9Y3D6 152 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 ZDBF2Q9HCK1 2354 aa22.02■■□□□ 1.12
UFD1-201ENST00000263202 ATXN2Q99700 1313 aaKnown RBP22.02■■□□□ 1.12
UFD1-201ENST00000263202 KMT2EQ8IZD2 1858 aa22.01■■□□□ 1.11
UFD1-201ENST00000263202 HDAC3O15379 428 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms