RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SLC35G4P0C7Q5 338 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 RABIFP47224 123 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 UBAP2LQ14157 1087 aaKnown RBP22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 KRT72Q14CN4 511 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 Q6ZSR6 202 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 MILR1Q7Z6M3 343 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 CDYL2Q8N8U2 506 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 OR56A3Q8NH54 315 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 CEP70Q8NHQ1 597 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 MAGEC3Q8TD91 643 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 C3orf30Q96M34 536 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 IER2Q9BTL4 223 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 CIDEBQ9UHD4 219 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 SLC22A14Q9Y267 594 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 A0A1W2PPC4 97 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 IFRD1O00458 451 aaPredicted RBP22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 DCNP07585 359 aaKnown RBP22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 EBLN1P0CF75 366 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 T-ENOLP0DO92 83 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 CLCNKAP51800 687 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 THOP1P52888 689 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 ZXDAP98168 799 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 DCUN1D3Q8IWE4 304 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 ZNF480Q8WV37 535 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 OSGEPL1Q9H4B0 414 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 TRPS1Q9UHF7 1281 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 WDR37Q9Y2I8 494 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 CHEK2O96017 543 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 CAPN1P07384 714 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 NCF2P19878 526 aaPredicted RBP22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 ITPKAP23677 461 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 RPL10P27635 214 aaKnown RBP22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 ARL1P40616 181 aaPredicted RBP22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 SCTRP47872 440 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 GRB7Q14451 532 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 TBCCQ15814 346 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 NXNQ6DKJ4 435 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 LARP4Q71RC2 724 aaKnown RBP eCLIP22.25■■□□□ 1.155e-8■□□□□ 9
SMARCB1-201ENST00000263121 TREML1Q86YW5 311 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 SNX31Q8N9S9 440 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 OR13H1Q8NG92 308 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 OR5AR1Q8NGP9 310 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 PCED1AQ9H1Q7 454 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 ZNF385DQ9H6B1 395 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 GPR27Q9NS67 375 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 ARL8BQ9NVJ2 186 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 KLQ9UEF7 1012 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 PNMA8BQ9ULN7 279 aaPredicted RBP22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 BTRCQ9Y297 605 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 PTGDR2Q9Y5Y4 395 aa22.25■■□□□ 1.15
SMARCB1-201ENST00000263121 ANKRD65E5RJM6 399 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 K7ESF4 209 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 UNC5CO95185 931 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 RPN2P04844 631 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 HGFP14210 728 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 CXCL12P48061 93 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 NAE1Q13564 534 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 THOC6Q86W42 341 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 DDIASQ8IXT1 998 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 SLC22A18ASQ8N1D0 253 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 PHC3Q8NDX5 983 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 OR5K2Q8NHB8 316 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 METTL6Q8TCB7 284 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 RAD51AP1Q96B01 352 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 ACTR5Q9H9F9 607 aaPredicted RBP22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 INTS7Q9NVH2 962 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 LRP4O75096 1905 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 PLXND1Q9Y4D7 1925 aa22.24■■□□□ 1.15
SMARCB1-201ENST00000263121 PRR5-ARHGAP8B1AHC4 643 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 CBX6O95503 412 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 AOC1P19801 751 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 IDSP22304 550 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 ALG11Q2TAA5 492 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 XKR7Q5GH72 579 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 TCHHL1Q5QJ38 904 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 TMEM198Q66K66 360 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 CHSY3Q70JA7 882 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 LRRC56Q8IYG6 542 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 TSACCQ96A04 125 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 CCT7Q99832 543 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 TXLNGQ9NUQ3 528 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 RNF11Q9Y3C5 154 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 METTL12A8MUP2 240 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 NDUFS2O75306 463 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 ATP5HO75947 161 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 CLDN9O95484 217 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 LINC00032P0C843 101 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 SRP54P61011 504 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 NCALDP61601 193 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 GGTA1PQ4G0N0 100 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 MAMSTRQ6ZN01 415 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 RNF165Q6ZSG1 346 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 TBC1D21Q8IYX1 336 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 CPSF7Q8N684 471 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 PPFIBP2Q8ND30 876 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 CADM4Q8NFZ8 388 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 PTCD3Q96EY7 689 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 INSM2Q96T92 566 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 TUBB6Q9BUF5 446 aa22.23■■□□□ 1.15
SMARCB1-201ENST00000263121 TRIT1Q9H3H1 467 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms