RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 SCLYQ96I15 445 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 PSKH2Q96QS6 385 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 SH3GL1Q99961 368 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 MRPL9Q9BYD2 267 aaKnown RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 DPY30Q9C005 99 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 K7ERQ8 282 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 CXCR6O00574 342 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 KLK8O60259 260 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 CLPXO76031 633 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 OAZ2O95190 189 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 SERPINA1P01009 418 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 KLKB1P03952 638 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 C7P10643 843 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 TTPAP49638 278 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 CLCN7P51798 805 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 KPNA1P52294 538 aaPredicted RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 TRAF3Q13114 568 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 GTF2H3Q13889 308 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 CPSF6Q16630 551 aaKnown RBP eCLIP9.84□□□□□ -0.83
LIG3-201ENST00000262327 SBSNQ6UWP8 590 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 STARD8Q92502 1023 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 NRBF2Q96F24 287 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 CASD1Q96PB1 797 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 ALOXE3Q9BYJ1 711 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 GPR63Q9BZJ6 419 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 MUC13Q9H3R2 512 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 VNN3Q9NY84 501 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 RBMX2Q9Y388 322 aaKnown RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 MYO1GB0I1T2 1018 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 KIAA0355O15063 1070 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 TAPBPO15533 448 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 ACSL4O60488 711 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 VNN2O95498 520 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 ZNF682O95780 498 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 MAPKAPK2P49137 400 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 BCAP31P51572 246 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 MAPK11Q15759 364 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 SMN1Q16637 294 aaKnown RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 LRRC26Q2I0M4 334 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 TCTN1Q2MV58 587 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 TMEM236Q5W0B7 351 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 GTF2IRD2BQ6EKJ0 949 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 TAS1R1Q7RTX1 841 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 EFL1Q7Z2Z2 1120 aaKnown RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 GTF2IRD2Q86UP8 949 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 RNF175Q8N4F7 328 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 DPP10Q8N608 796 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 ZNF548Q8NEK5 533 aaPredicted RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 UBE2FQ969M7 185 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 TSSK3Q96PN8 268 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 OR52E6Q96RD3 313 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 INPP5KQ9BT40 448 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 RIBC2Q9H4K1 309 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 POLE4Q9NR33 117 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 HEBP1Q9NRV9 189 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 WWOXQ9NZC7 414 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 ZNF490Q9ULM2 529 aaPredicted RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 PNMA8BQ9ULN7 279 aaPredicted RBP9.84□□□□□ -0.83
LIG3-201ENST00000262327 CARD8Q9Y2G2 431 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 PKP3Q9Y446 797 aa9.84□□□□□ -0.83
LIG3-201ENST00000262327 LOC100130705A0A1B0GUX0 176 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 ELOVL7A1L3X0 281 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 MTMR11A4FU01 709 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 ADAM12O43184 909 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 SH3BGRLO75368 114 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 TULP3O75386 442 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 PGRP06401 933 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 MZF1P28698 734 aaPredicted RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 TUFMP49411 452 aaKnown RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 EIF2B2P49770 351 aaKnown RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 TMBIM6P55061 237 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 VBP1P61758 197 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 GRSF1Q12849 480 aaKnown RBP eCLIP9.83□□□□□ -0.84
LIG3-201ENST00000262327 RAPSNQ13702 412 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 PON2Q15165 354 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 FAM209AQ5JX71 171 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 TMEM173Q86WV6 379 aaPredicted RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 NEURL2Q9BR09 285 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 TMEM175Q9BSA9 504 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 PRM3Q9NNZ6 103 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 ERVK-18Q9QC07 812 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 DKK3Q9UBP4 350 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 DAPK2Q9UIK4 370 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 FBXO9Q9UK97 447 aaPredicted RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 SNX5Q9Y5X3 404 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 FAM92AA1XBS5 289 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 LOC730098B7Z3J9 87 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 BNIP3LO60238 219 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 SLC25A14O95258 325 aaPredicted RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 TIMP1P01033 207 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 S100BP04271 92 aaPredicted RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 EPHA2P29317 976 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 GP2P55259 537 aaKnown RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 PHC1P78364 1004 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 GRIK2Q13002 908 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 DNASE1L3Q13609 305 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 ARHGEF7Q14155 803 aa9.83□□□□□ -0.84
LIG3-201ENST00000262327 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
LIG3-201ENST00000262327 RGS21Q2M5E4 152 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms