RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SPRED1Q7Z699 444 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 Q8N9G6 341 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 GIMAP7Q8NHV1 300 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 FAM76AQ8TAV0 307 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ADAMTS14Q8WXS8 1223 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 KCNJ9Q92806 393 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ELMO2Q96JJ3 720 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 C12orf66Q96MD2 445 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 NDNQ99608 321 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SLC30A3Q99726 388 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 SNX15Q9NRS6 342 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 IMP3Q9NV31 184 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 MKS1Q9NXB0 559 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 NKIRAS1Q9NYS0 192 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 GRID1Q9ULK0 1009 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 MTO1Q9Y2Z2 717 aaKnown RBP11.28□□□□□ -0.6
PFDN1-201ENST00000261813 ACOT9Q9Y305 439 aa11.28□□□□□ -0.6
PFDN1-201ENST00000261813 PCNX2A6NKB5 2137 aa11.27□□□□□ -0.6
PFDN1-201ENST00000261813 A0A1W2PPM1 405 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 A0A1W2PQM1 296 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 HMX2A2RU54 273 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 E5RI56 91 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 H3BQF6 201 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TM9SF1O15321 606 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 B4GAT1O43505 415 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 GLRA3O75311 464 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 RFPL1O75677 317 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 VIPP01282 170 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 APOA4P06727 396 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 C1QTNF9P0C862 333 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 CHRM3P20309 590 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 ACADLP28330 430 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 MAGEA12P43365 314 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 CLCN7P51798 805 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 OR1D5P58170 312 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 CCL7P80098 99 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TIAL1Q01085 375 aaKnown RBP eCLIP11.27□□□□□ -0.61
PFDN1-201ENST00000261813 BIRC2Q13490 618 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 BMPR2Q13873 1038 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 GBX1Q14549 363 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TSNAXIP1Q2TAA8 658 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TMEM26Q6ZUK4 368 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 OTOAQ7RTW8 1153 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-201ENST00000261813 PDZD3Q86UT5 571 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TRIM48Q8IWZ4 208 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 SLC22A15Q8IZD6 547 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-201ENST00000261813 ASZ1Q8WWH4 475 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TMEM159Q96B96 161 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 CXorf40BQ96DE9 158 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 ATXN7L3BQ96GX2 97 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 TBC1D10AQ9BXI6 508 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 STN1Q9H668 368 aaKnown RBP11.27□□□□□ -0.61
PFDN1-201ENST00000261813 SLC40A1Q9NP59 571 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 KCNK9Q9NPC2 374 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 LATS2Q9NRM7 1088 aa11.27□□□□□ -0.61
PFDN1-201ENST00000261813 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-201ENST00000261813 PIKFYVEQ9Y2I7 2098 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 FAM208BQ5VWN6 2430 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 A0A096LPK6 155 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 IFRD1O00458 451 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 NTN3O00634 580 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 SLCO2B1O94956 709 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 TOP3BO95985 862 aaKnown RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 ALDOAP04075 364 aaKnown RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 RPLP0P05388 317 aaKnown RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 C2P06681 752 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 FDXRP22570 491 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 HPDP32754 393 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 CCNFP41002 786 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 GPR3P46089 330 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 CDKN2DP55273 166 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 E2F1Q01094 437 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 PLOD1Q02809 727 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 COL9A2Q14055 689 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 GPR18Q14330 331 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 ZKSCAN8Q15776 578 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 TTLL9Q3SXZ7 439 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 ACSBG2Q5FVE4 666 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 PLEKHS1Q5SXH7 462 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 CDCP2Q5VXM1 449 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 LRRC8EQ6NSJ5 796 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 MRPL14Q6P1L8 145 aaKnown RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 KLC3Q6P597 504 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 RAB44Q7Z6P3 723 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 CHCHD4Q8N4Q1 142 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 NKAPQ8N5F7 415 aaKnown RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 ZBTB2Q8N680 514 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 BANPQ8N9N5 519 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 AVL9Q8NBF6 648 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 SIDT2Q8NBJ9 832 aaKnown RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 ACVR1CQ8NER5 493 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 CD200R1Q8TD46 325 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 TFGQ92734 400 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-201ENST00000261813 SH3KBP1Q96B97 665 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 APOPT1Q96IL0 206 aa11.26□□□□□ -0.61
PFDN1-201ENST00000261813 SLC38A3Q99624 504 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms