RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 SORCS1Q8WY21 1168 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 CENPIQ92674 756 aaPredicted RBP13.63□□□□□ -0.23
CDH1-201ENST00000261769 SLC35G5Q96KT7 338 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 CLN6Q9NWW5 311 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 THUMPD1Q9NXG2 353 aaKnown RBP13.63□□□□□ -0.23
CDH1-201ENST00000261769 FAM159BA6NKW6 160 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
CDH1-201ENST00000261769 DUX1O43812 170 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 CST1P01037 141 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
CDH1-201ENST00000261769 DSC3Q14574 896 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 FGD2Q7Z6J4 655 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 THOC6Q86W42 341 aaKnown RBP13.63□□□□□ -0.23
CDH1-201ENST00000261769 CILP2Q8IUL8 1156 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 SCML4Q8N228 414 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 CNTD1Q8N815 330 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 ZMIZ2Q8NF64 920 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 HBEGFQ99075 208 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 EBPLQ9BY08 206 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 SLC17A9Q9BYT1 436 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 TPSD1Q9BZJ3 242 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 MVB12BQ9H7P6 319 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 ADAP2Q9NPF8 381 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 HCFC1R1Q9NWW0 138 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 ZNF282Q9UDV7 671 aaPredicted RBP13.63□□□□□ -0.23
CDH1-201ENST00000261769 SLC2A6Q9UGQ3 507 aa13.63□□□□□ -0.23
CDH1-201ENST00000261769 PIP5K1BO14986 540 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 TSPAN19P0C672 248 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 PRPS1L1P21108 318 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 KHKP50053 298 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 C10orf62Q5T681 223 aaPredicted RBP13.62□□□□□ -0.23
CDH1-201ENST00000261769 TMIGD1Q6UXZ0 262 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 C8orf59Q8N0T1 100 aaPredicted RBP13.62□□□□□ -0.23
CDH1-201ENST00000261769 RORBQ92753 470 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 JSRP1Q96MG2 331 aaPredicted RBP13.62□□□□□ -0.23
CDH1-201ENST00000261769 DGAT2Q96PD7 388 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 SLC22A14Q9Y267 594 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 KCTD3Q9Y597 815 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 FAM86C2PA6NEL3 165 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 C2orf71A6NGG8 1288 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 SMNDC1O75940 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH1-201ENST00000261769 APBB3O95704 486 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 DRD4P21917 467 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 RABIFP47224 123 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 SLC7A9P82251 487 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 RALGPS2Q86X27 583 aaPredicted RBP13.62□□□□□ -0.23
CDH1-201ENST00000261769 MRPL38Q96DV4 380 aaKnown RBP13.62□□□□□ -0.23
CDH1-201ENST00000261769 ANKRD27Q96NW4 1050 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 DERL2Q9GZP9 239 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 LINC00597Q9H2U6 94 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 IGLON5A6NGN9 336 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 AHSGP02765 367 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 CD70P32970 193 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 BDKRB1P46663 353 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 ZBTB6Q15916 424 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 LRRC74BQ6ZQY2 392 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 FAM92BQ6ZTR7 304 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 HTR3DQ70Z44 454 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 RANBP3LQ86VV4 465 aaPredicted RBP13.62□□□□□ -0.23
CDH1-201ENST00000261769 TMEM126BQ8IUX1 230 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 CADM2Q8N3J6 435 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 C7orf57Q8NEG2 295 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 GPR151Q8TDV0 419 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 SLC13A3Q8WWT9 602 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 SLC5A11Q8WWX8 675 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 ARHGAP9Q9BRR9 750 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 DUSP26Q9BV47 211 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 TRIM39Q9HCM9 518 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 PRKAB1Q9Y478 270 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 AXIN1O15169 862 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 REM1O75628 298 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 AGR2O95994 175 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 SEPHS1P49903 392 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 PTCRAQ6ISU1 281 aaPredicted RBP13.62□□□□□ -0.23
CDH1-201ENST00000261769 SLC29A4Q7RTT9 530 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 GPR22Q99680 433 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 KCNS3Q9BQ31 491 aa13.62□□□□□ -0.23
CDH1-201ENST00000261769 SMIM31A0A1B0GVY4 71 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ELOVL7A1L3X0 281 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 MAGEB17A8MXT2 336 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 MID1O15344 667 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ARHGEF9O43307 516 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 IFNW1P05000 195 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 DCAF12L1Q5VU92 463 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TRIM74Q86UV6 250 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ALYREFQ86V81 257 aaKnown RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 APCDD1Q8J025 514 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 BANPQ8N9N5 519 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 GRIP2Q9C0E4 1043 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 POPDC3Q9HBV1 291 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 DLGAP2Q9P1A6 1054 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TCRBV7S3A2A0A539 114 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 PRORSD1PA6NEY8 169 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ZBTB42B2RXF5 422 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 XKRYO14609 159 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TLX3O43711 291 aaPredicted RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 PRG2P13727 222 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms