RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 NETO1Q8TDF5 533 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 GTF2H4Q92759 462 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 YTHDF1Q9BYJ9 559 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 MAGEH1Q9H213 219 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 PARVBQ9HBI1 364 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 PRDM8Q9NQV8 689 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 LOC730098B7Z3J9 87 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 SEC14L2O76054 403 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 OAZ2O95190 189 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 EIF2B2P49770 351 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 VBP1P61758 197 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 DNASE1L3Q13609 305 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 CACHD1Q5VU97 1274 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 UTS2BQ765I0 119 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 ZBTB8BQ8NAP8 495 aaPredicted RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 PNPT1Q8TCS8 783 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 FUBP3Q96I24 572 aaKnown RBP eCLIP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 DOK1Q99704 481 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 PDFQ9HBH1 243 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 TBCCD1Q9NVR7 557 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 MARCH5Q9NX47 278 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 TRIOBPQ9H2D6 2365 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 KRT87PA6NCN2 255 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 hCG_2039718K7EN88 272 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 AXIN1O15169 862 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 IDUAP35475 653 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 KPNA1P52294 538 aaPredicted RBP14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 RHOAP61586 193 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 SERPINA9Q86WD7 417 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 RGL4Q8IZJ4 473 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 C10orf111Q8N326 155 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 ARL10Q8N8L6 244 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 PDPRQ8NCN5 879 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 OR7A2PQ8NGA2 310 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 PEX13Q92968 403 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 PYCR2Q96C36 320 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 RHNO1Q9BSD3 238 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 POLE4Q9NR33 117 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 TMEM9Q9P0T7 183 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 C3orf18Q9UK00 162 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 TRIM64A6NGJ6 449 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 RGS14O43566 566 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 NDUFS2O75306 463 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 CREG1O75629 220 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 FKBP9O95302 570 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 NADKO95544 446 aaPredicted RBP14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 ANGPTL1O95841 491 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 HTR1AP08908 422 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 GNPDA1P46926 289 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 RAPSNQ13702 412 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 PON2Q15165 354 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 FKBP9P1Q75LS8 142 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 ADAMTSL2Q86TH1 951 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 ADHFE1Q8IWW8 467 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 LKAAEAR1Q8TD35 194 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 MCOLN3Q8TDD5 553 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 KCNJ9Q92806 393 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 ISG20Q96AZ6 181 aaKnown RBP14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 TAMM41Q96BW9 452 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 PPP3R2Q96LZ3 170 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 BARD1Q99728 777 aaKnown RBP14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 OSBPL10Q9BXB5 764 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 SLC25A37Q9NYZ2 338 aa14.16□□□□□ -0.14
SFSWAP-201ENST00000261674 MTMR11A4FU01 709 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 K7ERQ8 282 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 PRAMEF1O95521 474 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 MAGP20916 626 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 CORO1AP31146 461 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 DCTP40126 519 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 SMN1Q16637 294 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 TMEM236Q5W0B7 351 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 CES5AQ6NT32 575 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 ADCK1Q86TW2 530 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 DPP10Q8N608 796 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 RORBQ92753 470 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 TOX2Q96NM4 488 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 RBM4BQ9BQ04 359 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 RBM4Q9BWF3 364 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 LRTM1Q9HBL6 345 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 ELOVL2Q9NXB9 296 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 ERVK-18Q9QC07 812 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 PCDHB14Q9Y5E9 798 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 TNPO3Q9Y5L0 923 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 SLC1A7O00341 560 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 BCKDKO14874 412 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 CPNE6O95741 557 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 ESR1P03372 595 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 PORP16435 677 aaPredicted RBP14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 MSH3P20585 1137 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 MZF1P28698 734 aaPredicted RBP14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 CA5AP35218 305 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 PTGER3P43115 390 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 RGS4P49798 205 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 DSC1Q08554 894 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 C9orf50Q5SZB4 431 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 ARMC12Q5T9G4 340 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 SUSD1Q6UWL2 747 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 TMEM169Q96HH4 297 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 MBOAT4Q96T53 435 aa14.15□□□□□ -0.14
SFSWAP-201ENST00000261674 TUBA1CQ9BQE3 449 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms