RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 DPYSL2Q16555 572 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 MBLAC2Q68D91 279 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 NCBP2-AS2Q69YL0 99 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 CCBE1Q6UXH8 406 aaPredicted RBP9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 NKD1Q969G9 470 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 MOCOSQ96EN8 888 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 BIRC8Q96P09 236 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 FAIM2Q9BWQ8 316 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 GMIPQ9P107 970 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 PLIN4Q96Q06 1357 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 MYH7BA7E2Y1 1941 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 HOXC6P09630 235 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 CYP2A6P11509 494 aaPredicted RBP9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 CD72P21854 359 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 POLR2LP62875 67 aaKnown RBP9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 MRPS6P82932 125 aaKnown RBP9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 C2orf80Q0P641 193 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 MTA1Q13330 715 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 PCLAFQ15004 111 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 KIAA1161Q6NSJ0 714 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 TAC4Q86UU9 113 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 RBFAQ8N0V3 343 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 SCML4Q8N228 414 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 ARMC10Q8N2F6 343 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 FAM110BQ8TC76 370 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 GATAD2BQ8WXI9 593 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 DDX1Q92499 740 aaKnown RBP9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 HMCESQ96FZ2 354 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 NFKBIZQ9BYH8 718 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR51V1Q9H2C8 321 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 MYH13Q9UKX3 1938 aa9.57□□□□□ -0.88
CTDSPL2-201ENST00000260327 FAM234BA2RU67 622 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 YJEFN3A6XGL0 299 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 KLF11O14901 512 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 MATN3O15232 486 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 PMM2O15305 246 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 GGT5P36269 586 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 MAP1SQ66K74 1059 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 PCSK9Q8NBP7 692 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 NRG4Q8WWG1 115 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 PCED1BQ96HM7 432 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZCCHC2Q9C0B9 1178 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 FAM105AQ9NUU6 356 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 CLCA3PQ9Y6N3 262 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 LOC100509620A0A075B734 347 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 CRYZL1O95825 349 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 OPN1SWP03999 348 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ANXA4P09525 319 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 TSPAN5P62079 268 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 IFI44LQ53G44 452 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 SYPL2Q5VXT5 272 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 C9orf131Q5VYM1 1079 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 LINGO4Q6UY18 593 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 TMPRSS11BQ86T26 416 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 FTHL17Q9BXU8 183 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 XKR8Q9H6D3 395 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ATP13A3Q9H7F0 1226 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 EIF2B3Q9NR50 452 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 M0R233 179 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 HOXA2O43364 376 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 RFPL2O75678 378 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 SORBS2O94875 1100 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 CLDN9O95484 217 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 IFNGP01579 166 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 DBIP07108 87 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 AKR1A1P14550 325 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 LHCGRP22888 699 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 EIF2S3P41091 472 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 RAB2AP61019 212 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 MC1RQ01726 317 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 NOMO2Q5JPE7 1267 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 OGFRL1Q5TC84 451 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 SNX29P2Q8IUI4 249 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 HID1Q8IV36 788 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 CPNE9Q8IYJ1 553 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF641Q96N77 438 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF350Q9GZX5 532 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 DPAGT1Q9H3H5 408 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ERVK13-1Q9NX77 482 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ATPIF1Q9UII2 106 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 DERAQ9Y315 318 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 PCDHGC4Q9Y5F7 938 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 PSAT1Q9Y617 370 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 FER1L4A9Z1Z3 1794 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 MYBPHLA2RUH7 354 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR2B3O76000 313 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 TOXO94900 526 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLITRK5O94991 958 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ARFIP1P53367 373 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 EEFSECP57772 596 aaKnown RBP9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 CDKL1Q00532 357 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ASRGL1Q7L266 308 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 ITIH5Q86UX2 942 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 CFAP206Q8IYR0 622 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 DTX3Q8N9I9 347 aa9.56□□□□□ -0.88
CTDSPL2-201ENST00000260327 TRUB1Q8WWH5 349 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms