RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 PYCR3Q53H96 274 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 OR9A1PQ8NGU1 263 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 TUBGCP3Q96CW5 907 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 CMTM5Q96DZ9 223 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 MED8Q96G25 268 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 MAGEB10Q96LZ2 347 aaPredicted RBP18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 WDR92Q96MX6 357 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 CATSPER2Q96P56 530 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 C6orf106Q9H6K1 298 aaPredicted RBP18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 RIC8BQ9NVN3 520 aa18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 WSB2Q9NYS7 404 aaPredicted RBP18.23■□□□□ 0.51
TNFSF9-201ENST00000245817 ATP6AP2A0A1C7CYW4 349 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 PRSS38A1L453 326 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 TOR1BO14657 336 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 ATP6AP2O75787 350 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 DNAJC8O75937 253 aaPredicted RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 SLC16A8O95907 504 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 T-ENOLP0DO92 83 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 ITPKAP23677 461 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 ADSLP30566 484 aaPredicted RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 NUDT1P36639 197 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 MNAT1P51948 309 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 NAE1Q13564 534 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 SYTL1Q8IYJ3 562 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 RAD51AP1Q96B01 352 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 BMFQ96LC9 184 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 GPR174Q9BXC1 333 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 TPSD1Q9BZJ3 242 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 ZDHHC5Q9C0B5 715 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 CARS2Q9HA77 564 aaKnown RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 MRPL40Q9NQ50 206 aaKnown RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 C2orf42Q9NWW7 574 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 TRPS1Q9UHF7 1281 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 DMTF1Q9Y222 760 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 CA5BQ9Y2D0 317 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 H0YHG0 523 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 SLC22A2O15244 555 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 NDUFS2O75306 463 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 IDSP22304 550 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 CLCNKAP51800 687 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 CCSMST1Q4G0I0 132 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 IL27RAQ6UWB1 636 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 XKR5Q6UX68 686 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 THOC6Q86W42 341 aaKnown RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 TREML1Q86YW5 311 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 DCUN1D3Q8IWE4 304 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 SPEM1Q8N4L4 309 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 CPSF7Q8N684 471 aaKnown RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 SPDYE1Q8NFV5 336 aaPredicted RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 PTCD3Q96EY7 689 aaKnown RBP18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 OR2M4Q96R27 311 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 AKTIPQ9H8T0 292 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 CIDEBQ9UHD4 219 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 LNPEPQ9UIQ6 1025 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 KCNK6Q9Y257 313 aa18.22■□□□□ 0.51
TNFSF9-201ENST00000245817 TTC28Q96AY4 2481 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 NUMA1Q14980 2115 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 ANKRD12Q6UB98 2062 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 KRT87PA6NCN2 255 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 CFAP73A6NFT4 308 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 H0Y8X5 98 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 MYO1CO00159 1063 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 FUCA1P04066 466 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 LBPP18428 481 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 RPL10P27635 214 aaKnown RBP18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 PTPN4P29074 926 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 RABIFP47224 123 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 PFN3P60673 137 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 STX1BP61266 288 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 KLF10Q13118 480 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 TMEM198Q66K66 360 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 CAPN13Q6MZZ7 669 aaPredicted RBP18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 LARP4Q71RC2 724 aaKnown RBP eCLIP18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 EDAQ92838 391 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 SCARF2Q96GP6 870 aaPredicted RBP18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 C3orf30Q96M34 536 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 TRIT1Q9H3H1 467 aaKnown RBP18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 TUBB1Q9H4B7 451 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 KLQ9UEF7 1012 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 TDRKHQ9Y2W6 561 aaKnown RBP18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 PTGDR2Q9Y5Y4 395 aa18.21■□□□□ 0.51
TNFSF9-201ENST00000245817 CLGNO14967 610 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 KRT6AP02538 564 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 KRT6BP04259 564 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 IMPA1P29218 277 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 PRDX6P30041 224 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 HALP42357 657 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 KRT6CP48668 564 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 SIGLEC14Q08ET2 396 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 TSTA3Q13630 321 aaPredicted RBP18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 KRT33BQ14525 404 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 ZRSR2Q15696 482 aaKnown RBP18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 GCNT7Q6ZNI0 430 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 RD3Q7Z3Z2 195 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 RAB42Q8N4Z0 105 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 PHC3Q8NDX5 983 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 PJA1Q8NG27 643 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 OR56A3Q8NH54 315 aa18.2■□□□□ 0.5
TNFSF9-201ENST00000245817 RLN3Q8WXF3 142 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms