RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CCNHP51946 323 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CHN2P52757 468 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PER3P56645 1201 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PSME3P61289 254 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 HERVK_113P63132 956 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ROR2Q01974 943 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 DSC2Q02487 901 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 FASTKQ14296 549 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 POLD3Q15054 466 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PDK3Q15120 406 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 TYSND1Q2T9J0 566 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SPATS1Q496A3 300 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 GAGE13Q4V321 117 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 LIN52Q52LA3 116 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ALFQ53S48 1182 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF789Q5FWF6 425 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF678Q5SXM1 525 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 RNF220Q5VTB9 566 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF280DQ6N043 979 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 FBXL22Q6P050 247 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SLC30A9Q6PML9 568 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 TFAP2DQ7Z6R9 452 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ISCA2Q86U28 154 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CLYBLQ8N0X4 340 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 BBS5Q8N3I7 341 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 BRSK1Q8TDC3 778 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 C2orf15Q8WU43 125 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 NCSTNQ92542 709 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 FBXO32Q969P5 355 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PSMG2Q969U7 264 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ROPN1LQ96C74 230 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PABPC5Q96DU9 382 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 DCUN1D1Q96GG9 259 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 NDNQ99608 321 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ERVK-6Q9BXR3 956 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SLC6A15Q9H2J7 730 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 TFB2MQ9H5Q4 396 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 INTS10Q9NVR2 710 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SLC4A7Q9Y6M7 1214 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 MIA3Q5JRA6 1907 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 NEMP2A6NFY4 417 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM233B4DJY2 109 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 TRIM24O15164 1050 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CNTN5O94779 1100 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 NDST3O95803 873 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PABPC4LP0CB38 370 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ZCCHC18P0CG32 403 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 HNRNPLP14866 589 aaKnown RBP eCLIP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CD9P21926 228 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 LPOP22079 712 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 KCNA5P22460 613 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CTSSP25774 331 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 DPP6P42658 865 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 KCNC1P48547 511 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 MRPL19P49406 292 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PGGT1BP53609 377 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 STX1BP61266 288 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 MRPS22P82650 360 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 MS4A2Q01362 244 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CREB5Q02930 508 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 FOLH1Q04609 750 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 EFEMP1Q12805 493 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF235Q14590 738 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CTXN3Q4LDR2 81 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 COQ5Q5HYK3 327 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CLLU1OSQ5K130 101 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SAMD4BQ5PRF9 694 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 REP15Q6BDI9 236 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 C8orf82Q6P1X6 216 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PRMT9Q6P2P2 845 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 UGT2A3Q6UWM9 527 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 USP45Q70EL2 814 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 LARP4Q71RC2 724 aaKnown RBP eCLIP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PTAR1Q7Z6K3 402 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF280BQ86YH2 543 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PGBD5Q8N414 524 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SPATA6LQ8N4H0 392 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PCYOX1LQ8NBM8 494 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ANKRD49Q8WVL7 239 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 IGSF8Q969P0 613 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 MOCOSQ96EN8 888 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SGF29Q96ES7 293 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PPP1R36Q96LQ0 422 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 KLHL5Q96PQ7 755 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 FAM193BQ96PV7 902 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 MAGEH1Q9H213 219 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ELAC1Q9H777 363 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PDFQ9HBH1 243 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SYTL2Q9HCH5 934 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 SPAG4Q9NPE6 437 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PAPOLBQ9NRJ5 636 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM161AQ9NX61 479 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 TMCO1Q9UM00 188 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CASP8AP2Q9UKL3 1982 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 FRMPD3Q5JV73 1810 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 SRCAPQ6ZRS2 3230 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 F8W810 466 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 CD3EAPO15446 510 aaKnown RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 CFLARO15519 480 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 B4GALT3O60512 393 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms