RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C1QTNF12Q5T7M4 302 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 PARM1Q6UWI2 310 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 IFNEQ86WN2 208 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 MIB1Q86YT6 1006 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 NKAPQ8N5F7 415 aaKnown RBP20.13■□□□□ 0.81
SNX3-201ENST00000230085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNX3-201ENST00000230085 OR56A4Q8NGH8 313 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 BRSK1Q8TDC3 778 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 FGF14Q92915 247 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 SMARCD2Q92925 531 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 SDCCAG3Q96C92 435 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 SLC39A13Q96H72 371 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 SERPINB11Q96P15 392 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 CGREF1Q99674 301 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 TDP1Q9NUW8 608 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 HSPE1-MOB4S4R3N1 261 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 E2F6O75461 281 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 JRKO75564 520 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 GOT2P00505 430 aaKnown RBP20.12■□□□□ 0.81
SNX3-201ENST00000230085 TCF3P15923 654 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 PFKLP17858 780 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 IL12AP29459 219 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 HOXD12P35452 270 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 GRK3P35626 688 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 ISL1P61371 349 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 SPCS2Q15005 226 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 PLA2G4EQ3MJ16 856 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 SETMARQ53H47 684 aaPredicted RBP20.12■□□□□ 0.81
SNX3-201ENST00000230085 TANGO2Q6ICL3 276 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 SULT1C3Q6IMI6 304 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 PRSS48Q7RTY5 328 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 SYVN1Q86TM6 617 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 ADHFE1Q8IWW8 467 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 TTC16Q8NEE8 873 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 ZNF555Q8NEP9 628 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 TBATAQ96M53 351 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 NT5MQ9NPB1 228 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 GKN1Q9NS71 199 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 CATSPERZQ9NTU4 200 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 LIMD1Q9UGP4 676 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 DNMT3LQ9UJW3 386 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 ZNF225Q9UK10 706 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 RNF112Q9ULX5 631 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 BTRCQ9Y297 605 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 MED16Q9Y2X0 877 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 NEUROG3Q9Y4Z2 214 aa20.12■□□□□ 0.81
SNX3-201ENST00000230085 LRRC14BA6NHZ5 514 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 G3V2T6 193 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 ANKRD28O15084 1053 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 AQP9O43315 295 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 ECI2O75521 394 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 NDST3O95803 873 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 ITGAMP11215 1152 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 TGM1P22735 817 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 FCARP24071 287 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 HTR1BP28222 390 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 CXCR4P61073 352 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 SLC7A9P82251 487 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 ZP2Q05996 745 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 RAD51Q06609 339 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 IL10RBQ08334 325 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 DPY19L1Q2PZI1 675 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 CCDC92Q53HC0 331 aaPredicted RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 TMEM214Q6NUQ4 689 aaKnown RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.11■□□□□ 0.81
SNX3-201ENST00000230085 PHF10Q8WUB8 498 aaKnown RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 FUBP1Q96AE4 644 aaKnown RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 TMEM74Q96NL1 305 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 CDK5RAP1Q96SZ6 601 aaKnown RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 SEPHS2Q99611 448 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 RPP25Q9BUL9 199 aaKnown RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 TAS2R13Q9NYV9 303 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 C3orf18Q9UK00 162 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 ERVW-1Q9UQF0 538 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 VPS9D1Q9Y2B5 631 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 CRYL1Q9Y2S2 319 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 GPC6Q9Y625 555 aaPredicted RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 CHD5Q8TDI0 1954 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 LOC730098B7Z3J9 87 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 B4GAT1O43505 415 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 CRCPO75575 148 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 SLC10A7Q0GE19 358 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 MTA1Q13330 715 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 TIGD2Q4W5G0 525 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 ZNF691Q5VV52 312 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 LAIR2Q6ISS4 152 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 STK32CQ86UX6 486 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 LACC1Q8IV20 430 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 CLEC4FQ8N1N0 589 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 MFSD4AQ8N468 514 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 OR4L1Q8NH43 312 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 RSPRY1Q96DX4 576 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 LRRC3BQ96PB8 259 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 AMBRA1Q9C0C7 1298 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 TRIT1Q9H3H1 467 aaKnown RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 ZFP14Q9HCL3 533 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 OLA1Q9NTK5 396 aaKnown RBP20.11■□□□□ 0.81
SNX3-201ENST00000230085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.11■□□□□ 0.813e-9■■■■□ 25.5
SNX3-201ENST00000230085 MARCH2Q9P0N8 246 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 BAG5Q9UL15 447 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms