RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PDE7BQ9NP56 450 aa17.51■□□□□ 0.39
PFN1-201ENST00000225655 INTS10Q9NVR2 710 aaKnown RBP17.51■□□□□ 0.39
PFN1-201ENST00000225655 NSMCE4AQ9NXX6 385 aa17.51■□□□□ 0.39
PFN1-201ENST00000225655 SLC24A2Q9UI40 661 aa17.51■□□□□ 0.39
PFN1-201ENST00000225655 CROTQ9UKG9 612 aa17.51■□□□□ 0.39
PFN1-201ENST00000225655 TLCD2A6NGC4 264 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 MT-ND3P03897 115 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 GSTM1P09488 218 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 OR56A5P0C7T3 313 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 CCNYL3P0C7X3 344 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 ARNTP27540 789 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 TNFRSF8P28908 595 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 PRLHRP49683 370 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 CDKN1CP49918 316 aaPredicted RBP17.5■□□□□ 0.39
PFN1-201ENST00000225655 GSTM4Q03013 218 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 KCNC4Q03721 635 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 ILF2Q12905 390 aaKnown RBP17.5■□□□□ 0.39
PFN1-201ENST00000225655 TUBB3Q13509 450 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 FASTKD3Q14CZ7 662 aaKnown RBP17.5■□□□□ 0.39
PFN1-201ENST00000225655 HSP90AA5PQ58FG0 334 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 ZNF449Q6P9G9 518 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 OOSP2Q86WS3 158 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 RELL1Q8IUW5 271 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 CARFQ8N187 725 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 APOBEC4Q8WW27 367 aaKnown RBP17.5■□□□□ 0.39
PFN1-201ENST00000225655 MAP3K3Q99759 626 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 CCM2Q9BSQ5 444 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 CCDC68Q9H2F9 335 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 IARS2Q9NSE4 1012 aaKnown RBP17.5■□□□□ 0.39
PFN1-201ENST00000225655 HRASLS2Q9NWW9 162 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 ZFATQ9P243 1243 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 TXNDC16Q9P2K2 825 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 FAM8A1Q9UBU6 413 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 LNPEPQ9UIQ6 1025 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 RARRES3Q9UL19 164 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 MRPS18BQ9Y676 258 aaKnown RBP17.5■□□□□ 0.39
PFN1-201ENST00000225655 COLEC10Q9Y6Z7 277 aa17.5■□□□□ 0.39
PFN1-201ENST00000225655 IGLV3-16A0A075B6K0 115 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 C17orf113A0A1B0GUU1 675 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 GOLGA8KD6RF30 607 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 H3BMM5 538 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 GOLGA8TH3BQL2 631 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 FTH1P02794 183 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 FOLR1P15328 257 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 NDUFS1P28331 727 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 CSRP3P50461 194 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 HSD11B2P80365 405 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 ACY1Q03154 408 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 MGAT5Q09328 741 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 KCNAB1Q14722 419 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 TYSND1Q2T9J0 566 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 DEFB109BQ30KR1 87 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 CAPRIN2Q6IMN6 1127 aaKnown RBP17.49■□□□□ 0.39
PFN1-201ENST00000225655 DUS1LQ6P1R4 473 aaKnown RBP17.49■□□□□ 0.39
PFN1-201ENST00000225655 C16orf46Q6P387 395 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 CAPN12Q6ZSI9 719 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 KIAA0408Q6ZU52 694 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 C3orf62Q6ZUJ4 267 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 CILP2Q8IUL8 1156 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 CFAP206Q8IYR0 622 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 D2HGDHQ8N465 521 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 HM13Q8TCT9 377 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 RNF31Q96EP0 1072 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 RMDN2Q96LZ7 410 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 FGF21Q9NSA1 209 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 MARCH4Q9P2E8 410 aaPredicted RBP17.49■□□□□ 0.39
PFN1-201ENST00000225655 GNPTGQ9UJJ9 305 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 KCND3Q9UK17 655 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 PADI1Q9ULC6 663 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 PCDHB3Q9Y5E6 796 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 HEBP2Q9Y5Z4 205 aa17.49■□□□□ 0.39
PFN1-201ENST00000225655 UBA6A0AVT1 1052 aaPredicted RBP17.48■□□□□ 0.39
PFN1-201ENST00000225655 OR6C74A6NCV1 312 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 PRMT5O14744 637 aaPredicted RBP17.48■□□□□ 0.39
PFN1-201ENST00000225655 TIAF1O95411 115 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 PRSS56P0CW18 603 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 ERVK-10P10266 1014 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 ECHS1P30084 290 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 ARL4DP49703 201 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 ATP1A1-AS1Q5TC04 95 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 PTRHD1Q6GMV3 140 aaKnown RBP17.48■□□□□ 0.39
PFN1-201ENST00000225655 PWWP2BQ6NUJ5 590 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 ARMC6Q6NXE6 501 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 LILRA3Q8N6C8 439 aaPredicted RBP17.48■□□□□ 0.39
PFN1-201ENST00000225655 WDR83Q9BRX9 315 aaKnown RBP17.48■□□□□ 0.39
PFN1-201ENST00000225655 TRIM4Q9C037 500 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 FBXO5Q9UKT4 447 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
PFN1-201ENST00000225655 C21orf140B9A014 251 aa17.47■□□□□ 0.39
PFN1-201ENST00000225655 ZBTB11O95625 1053 aaPredicted RBP17.47■□□□□ 0.39
PFN1-201ENST00000225655 RECKO95980 971 aa17.47■□□□□ 0.39
PFN1-201ENST00000225655 EBLN1P0CF75 366 aa17.47■□□□□ 0.39
PFN1-201ENST00000225655 RPS3P23396 243 aaKnown RBP eCLIP17.47■□□□□ 0.392e-17■■□□□ 13.1
PFN1-201ENST00000225655 SLC1A2P43004 574 aa17.47■□□□□ 0.39
PFN1-201ENST00000225655 KRT33BQ14525 404 aa17.47■□□□□ 0.39
PFN1-201ENST00000225655 ZNF658BQ4V348 819 aaPredicted RBP17.47■□□□□ 0.39
PFN1-201ENST00000225655 CYS1Q717R9 158 aa17.47■□□□□ 0.39
PFN1-201ENST00000225655 TRMT10CQ7L0Y3 403 aaKnown RBP17.47■□□□□ 0.39
PFN1-201ENST00000225655 LDB1Q86U70 411 aaPredicted RBP17.47■□□□□ 0.39
PFN1-201ENST00000225655 CNTN4Q8IWV2 1026 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms