RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF852Q6ZMS4 543 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 EFL1Q7Z2Z2 1120 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MILR1Q7Z6M3 343 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 AMZ2Q86W34 360 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 FLCNQ8NFG4 579 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 METTL6Q8TCB7 284 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NAF1Q96HR8 494 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TM7SF3Q9NS93 570 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 GIMAP2Q9UG22 337 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC23A2Q9UGH3 650 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 GPR89AB7ZAQ6 455 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 GPR89BP0CG08 455 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PIK3R1P27986 724 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC34A1Q06495 639 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TMEM31Q5JXX7 168 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 OXR1Q8N573 874 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 HMGB4Q8WW32 186 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 STMN2Q93045 179 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 FBXL8Q96CD0 374 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MYOCQ99972 504 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ATG10Q9H0Y0 220 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CA14Q9ULX7 337 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 WDR47O94967 919 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 FUCA1P04066 466 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ALDOCP09972 364 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SFSWAPQ12872 951 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CCDC6Q16204 474 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TRMT5Q32P41 509 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ZNF687Q8N1G0 1237 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SPDYE1Q8NFV5 336 aaPredicted RBP19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TUBGCP3Q96CW5 907 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 OR52A5Q9H2C5 316 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CIDEBQ9UHD4 219 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC22A14Q9Y267 594 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 C1orf105O95561 183 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 COX4I1P13073 169 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PRDX6P30041 224 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ERFP50548 548 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SCIMPQ6UWF3 145 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CCDC138Q96M89 665 aa19.16■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CIB2O75838 187 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC16A8O95907 504 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 EBLN1P0CF75 366 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 HGFP14210 728 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ACADLP28330 430 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 HTR6P50406 440 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PFN3P60673 137 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 GRB7Q14451 532 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PGM2L1Q6PCE3 622 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MYLK4Q86YV6 388 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 DEFB123Q8N688 67 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 FBXO15Q8NCQ5 510 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 OR2T11Q8NH01 316 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ASB12Q8WXK4 309 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CCT7Q99832 543 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 BTBD1Q9H0C5 482 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NMRK1Q9NWW6 199 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 STOX2Q9P2F5 926 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 EBF1Q9UH73 591 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ZNHIT2Q9UHR6 403 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 RNF11Q9Y3C5 154 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MUC3AQ02505 3323 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PRR35P0CG20 571 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ITGAXP20702 1163 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 IMPA1P29218 277 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 VHLP40337 213 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CCR3P51677 355 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 RPA4Q13156 261 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 C1orf146Q5VVC0 180 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 AGTRAPQ6RW13 159 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CHCHD4Q8N4Q1 142 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 HMGCLL1Q8TB92 370 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 HBEGFQ99075 208 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PKP4Q99569 1192 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MRGBPQ9NV56 204 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TRPS1Q9UHF7 1281 aa19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 DNMT3AQ9Y6K1 912 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-201ENST00000162749 KMOO15229 486 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 VPS4BO75351 444 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SORBS2O94875 1100 aaKnown RBP19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ITPKAP23677 461 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 HMOX2P30519 316 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SQLEQ14534 574 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 IL27RAQ6UWB1 636 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 LRRC74BQ6ZQY2 392 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 TRIM69Q86WT6 500 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ATL1Q8WXF7 558 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 APOOQ9BUR5 198 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ITM2CQ9NQX7 267 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 INTS7Q9NVH2 962 aaKnown RBP19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SLC17A4Q9Y2C5 497 aa19.14■□□□□ 0.65
TNFRSF1A-201ENST00000162749 POM121BA6NF01 834 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CEACAM5P06731 702 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CLNS1AP54105 237 aaKnown RBP19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ABRAXAS2Q15018 415 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 METRNLQ641Q3 311 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 Q6ZSR9 355 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PDZD3Q86UT5 571 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 OR2T34Q8NGX1 318 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 DNAJC9Q8WXX5 260 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms