RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Adap2Q8R2V5 381 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr952Q8VFD7 314 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Acsm1Q91VA0 573 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rwdd2bQ99M03 290 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Acox2Q9QXD1 681 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lactbl1S4R213 581 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 4931408C20RikE9PWP9 1381 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nrp2O35375 931 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 LatO54957 242 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Wnt10bP48614 389 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc6a4Q60857 630 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 PdgfrlQ6PE55 375 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Trpm4Q7TN37 1213 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Acsl5Q8JZR0 683 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mptx1Q8R1M8 219 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rpl14Q9CR57 217 aaKnown RBP11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dusp26Q9D700 211 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mrpl17Q9D8P4 176 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fam46aD3Z5S8 447 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nsmce4aG3XA30 381 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tango2P54797 276 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Uhrf2Q7TMI3 803 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 BpifcQ8C186 509 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mfsd5Q921Y4 450 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Med31Q9CXU1 131 aaKnown RBP11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Serinc3Q9QZI9 472 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lbx2Q9WUN8 195 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Znf382B2RXC5 579 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm10037E9PX85 104 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm21897J3KMP5 500 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm21750L7N228 499 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Znf143O70230 638 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 P01740 135 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 StacP97306 403 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Taar7aQ5QD12 358 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vrk2Q8BN21 503 aaKnown RBP11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fam110bQ8C739 366 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Asb12Q9D738 308 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Grb14Q9JLM9 538 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Znf207Q9JMD0 495 aaKnown RBP11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn1r238E9Q373 306 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tnfsf4P43488 198 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gpr156Q6PCP7 798 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Steap2Q8BWB6 489 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr818Q8VG46 318 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Serpinb11Q9CQV3 388 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prl8a8Q9DAS4 241 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ap1arE9PYF7 298 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn1r39G3UWE6 305 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Kcnk3O35111 409 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cd247P24161 164 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fdxacb1Q3UY23 622 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cdkn2cQ60772 168 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ipo13Q8K0C1 963 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lama4P97927 1816 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zfp384E9Q1A5 584 aaKnown RBP11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ebf3O08791 596 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Coro1aO89053 461 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Clec3bP43025 202 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Snta1Q61234 503 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prkd1Q62101 918 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fbxw21Q8BI38 468 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nufip1Q9QXX8 484 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pnpla6Q3TRM4 1355 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pias1O88907 651 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Npbwr1P49681 329 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 MertkQ60805 994 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ifngr2Q63953 332 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zbtb26Q8C8S0 451 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cacnb2Q8CC27 655 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prkd3Q8K1Y2 889 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Glis2Q8VDL9 521 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ing5Q9D8Y8 240 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fbxo40P62932 710 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tead3P70210 439 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cand1Q6ZQ38 1230 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fam25cQ8CF02 89 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Phc3Q8CHP6 981 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rab15Q8K386 212 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 9530002B09RikQ9EPV7 135 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rgs7O54829 469 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Arl6O88848 186 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 H2-Q8P14430 326 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 H2-Q6P79568 326 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 AccslQ3UX83 580 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nr0b2Q62227 260 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cachd1Q6PDJ1 1288 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr857Q7TRF7 309 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Klf8Q8BLM0 355 aaKnown RBP11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Setdb2Q8C267 713 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ugt2b34Q8K154 532 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Bmp10Q9R229 421 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Calhm3J3QMI4 347 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dpep1P31428 410 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ephx2P34914 554 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 DazlQ64368 298 aaKnown RBP11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tas2r13Q7M720 305 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rap2aQ80ZJ1 183 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Efemp1Q8BPB5 493 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pafah2Q8VDG7 390 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms