RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Grb10Q60760 621 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pdcd4Q61823 469 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 OgnQ62000 298 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Lemd2Q6DVA0 511 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc39a4Q78IQ7 660 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 RybpQ8CCI5 228 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Uts2rQ8VIH9 385 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 LsrQ99KG5 594 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm16286Q9CQX6 220 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fabp12Q9DAK4 132 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Prokr1Q9JKL1 393 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Extl1Q9JKV7 669 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm13078A2AGW8 474 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Man1b1A2AJ15 658 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 PfkmP47857 780 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 CtswP56203 371 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Acot8P58137 320 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 MtpnP62774 118 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gpr174Q3U507 335 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fcho2Q3UQN2 809 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cyp4f37Q3V1F1 546 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Med22Q62276 200 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fbxl8Q8CIG9 374 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Trim61Q8JZK6 461 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Spin4Q8K1L2 249 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gspt1Q8R050 636 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rgs18Q99PG4 235 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cndp2Q9D1A2 475 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Aar2Q9D2V5 384 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ccdc3Q9D6Y1 273 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 B9d1Q9R1S0 204 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gsk3bQ9WV60 420 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 H2-BlV9GXR0 257 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1480A0A140LIR8 359 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm12248A0A1W2P8B8 313 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cyp4a32A2A8T1 509 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1160A2AVT0 319 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Scamp3O35609 349 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gh1P06880 216 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fabp1P12710 127 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Uimc1Q5U5Q9 727 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Sort1Q6PHU5 825 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vac14Q80WQ2 782 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Serpina3fQ80X76 445 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Clec2eQ80XD9 204 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 RfkQ8CFV9 155 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1325Q8VF43 315 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Golga7Q91W53 137 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Sh3d19Q91X43 789 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 BollQ924M5 281 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 5330417H12RikQ9D3P2 110 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cacng4Q9JJV4 327 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vps29Q9QZ88 182 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1508Q9R0K4 310 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Kif13bA0A286YCV9 1847 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2abC0HKE1 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2acC0HKE2 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2adC0HKE3 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2aeC0HKE4 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2agC0HKE5 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2aiC0HKE6 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2anC0HKE7 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2aoC0HKE8 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2apC0HKE9 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Izumo4D3Z690 227 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 H2-T24F8VQG4 363 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn2r88L7N1W8 857 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn2r112L7N221 857 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hsd17b10O08756 261 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Serpinb9eO08806 377 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ech1O35459 327 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mup4P11590 178 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc10a7Q5PT53 340 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ppp1r14bQ62084 147 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 A4galtQ67BJ4 359 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist3h2aQ8BFU2 130 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Acat2Q8CAY6 397 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2afQ8CGP5 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2ahQ8CGP6 128 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hist1h2akQ8CGP7 130 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 H2afjQ8R1M2 129 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Etv3Q8R4Z4 513 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cops8Q8VBV7 209 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Plekhh3Q8VCE9 796 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Diras1Q91Z61 198 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Nrif2Q921B4 824 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pdia5Q921X9 517 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 AadacQ99PG0 398 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cmpk1Q9DBP5 196 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Xrn2Q9DBR1 951 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fbxo17Q9QZM8 286 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gpr137cE9Q343 423 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Zfp715G3X9T1 886 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm6502L7N456 481 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Kpna4O35343 521 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mpzl2O70255 215 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 RapsnP12672 412 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Nr4a1P12813 601 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ptger1P35375 405 aa10.1□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Aff3P51827 1254 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms