RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Atad1Q9D5T0 361 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Znrf4Q9DAH2 327 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pkp3Q9QY23 797 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Htra1Q9R118 480 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Enpp2Q9R1E6 862 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Fzd9Q9R216 592 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc2a5Q9WV38 501 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Adh6bA0A1D5RMB0 384 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm13212B1ASQ7 799 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 SpnP15702 395 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dsc3P55850 896 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tmem181aQ3U3W2 474 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nr1d2Q60674 576 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Hist2h2acQ64523 129 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ints6Q6PCM2 883 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc6a15Q8BG16 729 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Coq4Q8BGB8 266 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Metap1Q8BP48 386 aaKnown RBP13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pik3cbQ8BTI9 1064 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ankrd49Q8VE42 238 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr846Q8VET8 312 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 KmoQ91WN4 479 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mta3Q924K8 591 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Kat8Q9D1P2 458 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tchhl1Q9D3P1 638 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Yipf5Q9EQQ2 257 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Prmt1Q9JIF0 371 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Rad9aQ9Z0F6 389 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pnldc1B2RXZ1 531 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cyp2c68K7N6C2 491 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1121L7MTT1 314 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Neurod4O09105 330 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Clk3O35492 638 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 PuraP42669 321 aaKnown RBP13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pdx1P52946 284 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 GuloP58710 440 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 EpycP70186 322 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ankrd42Q3V096 527 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tmem255bQ5FW56 369 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Avpr1aQ62463 423 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Znf366Q6NS86 746 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 FukQ7TMC8 1090 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1288Q7TQY0 312 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mup21Q80YX8 181 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Smoc1Q8BLY1 463 aaKnown RBP13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Plekhn1Q8C886 359 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Bdh2Q8JZV9 245 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vmn1r6Q8R2D4 303 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1310Q8VF85 312 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1352Q8VGX5 309 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Metap1dQ9CPW9 335 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Glod5Q9D8I3 148 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nmnat1Q9EPA7 285 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 Fbxo8Q9QZN3 319 aa13.16□□□□□ -0.3
Nup88-201ENSMUST00000035283 BC024063A0A1W2P7G7 749 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm10800D3Z496 220 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ces2hF6Z9B9 558 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 2210016F16RikG3X8U3 338 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 LckP06240 509 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Znf703P0CL69 594 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Rps3P62908 243 aaKnown RBP13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cxcr5Q04683 374 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cpne7Q0VE82 557 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cyp2c66Q5GLZ0 490 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Uimc1Q5U5Q9 727 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sephs1Q8BH69 392 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nrip1Q8CBD1 1161 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Adnp2Q8CHC8 1165 aaKnown RBP13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Plac9Q8K262 108 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc38a4Q8R1S9 547 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nae1Q8VBW6 534 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mto1Q923Z3 669 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Zswim1Q9CWV7 455 aaKnown RBP13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dsn1Q9CYC5 348 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 PyurfQ9D1C3 112 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cmtm7Q9ESD6 167 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Asah2Q9JHE3 756 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Chrna6Q9R0W9 494 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dctn3Q9Z0Y1 186 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Numa1E9Q7G0 2094 aaKnown RBP13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Igkv10-96A0A140T8M1 115 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ankrd16A2AS55 361 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc16a8O35308 492 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cyp21P03940 487 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Hoxc8P09025 242 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Hsd17b4P51660 735 aaKnown RBP13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dusp2Q05922 318 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Kcnh6Q32ME0 950 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cdkn2cQ60772 168 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Wbp4Q61048 376 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sdf4Q61112 361 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dcaf13Q6PAC3 445 aaKnown RBP13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 A730061H03RikQ8BGD2 154 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gprc5aQ8BHL4 356 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ckap4Q8BMK4 575 aaKnown RBP13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Zmym6Q8BS54 1249 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Abi3Q8BYZ1 367 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 ScaiQ8C8N2 606 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vmn1r38Q8R2E1 302 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ttc4Q8R3H9 386 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms