RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Vmn1r198Q8R263 300 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pcdhga6Q91XY2 932 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 EtfaQ99LC5 333 aaKnown RBP15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Sesn3Q9CYP7 492 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 TrmuQ9DAT5 417 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 ArntlQ9WTL8 632 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Dock3Q8CIQ7 2027 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Serpine3E9Q6A2 401 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sult3a2G5E904 293 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm19965J3QNY8 723 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm6337K7N6X9 211 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm3115L7N285 211 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 SykP48025 629 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ccbe1Q3MI99 408 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ms4a15Q3UPL6 245 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc25a23Q6GQS1 467 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olig3Q6PFG8 273 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Acsl5Q8JZR0 683 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Actr8Q8R2S9 624 aaKnown RBP15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 RhoqQ8R527 205 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Eif2b2Q99LD9 351 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Trim12aQ99PQ1 284 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 2610042L04RikQ9D073 150 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 GrifinQ9D1U0 144 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Usp12Q9D9M2 370 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pak1ip1Q9DCE5 382 aaKnown RBP15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Rab13Q9DD03 202 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Hapln2Q9ESM3 341 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 HephQ9Z0Z4 1157 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Mad2l1Q9Z1B5 205 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 EXOC1LB9EK06 172 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn2r94E9PZK8 818 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm4788E9Q8B5 879 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm14496K7N5U4 849 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Coro1aO89053 461 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ptger4P32240 513 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 GlrbP48168 496 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 SctrQ5FWI2 447 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Eif2b4Q61749 524 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sec24dQ6NXL1 1032 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zfp324Q78F42 583 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vac14Q80WQ2 782 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 R3hcc1lQ8BJM3 775 aaKnown RBP15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tmem203Q8R235 136 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn1r6Q8R2D4 303 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vwa1Q8R2Z5 415 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 CutalQ9D1U5 156 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cacng3Q9JJV5 315 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tas2r119Q9JKT2 335 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc22a4Q9Z306 553 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Krt6bQ9Z331 562 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pkd2l1A2A259 760 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 BC035947B2RQY6 695 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm3642K7N6V4 267 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 ApoeP08226 311 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 DbtP53395 482 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tekt4Q149S1 447 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Brsk1Q5RJI5 778 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 MtdhQ80WJ7 579 aaKnown RBP15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ppp1r1cQ8BKK4 108 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc45a3Q8K0H7 553 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr1311Q8VET0 312 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 KmoQ91WN4 479 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 Riok2Q9CQS5 547 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 ArskQ9D2L1 553 aa15.89■□□□□ 0.13
Trim28-201ENSMUST00000005705 A0A1L1ST33 502 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 2610001J05RikF2Z3Y9 59 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc9a3G3X939 829 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 St3gal5O88829 414 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 MocosQ14CH1 862 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Hk3Q3TRM8 922 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Q3UK37 420 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pcgf5Q3UK78 256 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Myo1dQ5SYD0 1006 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Mapre1Q61166 268 aaKnown RBP15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pik3r3Q64143 461 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr183Q8VFB9 309 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Q9CZV2 255 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Wdr53Q9DB94 358 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pld1Q9Z280 1074 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Lcn5A2AJB7 192 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sec14l5B2RXM5 696 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sult3a1O35403 293 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Scrg1O88745 98 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 P01810 119 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gstm1P10649 218 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 H2-Q8P14430 326 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 H2-Q6P79568 326 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pou1f1Q00286 291 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Eef2kmtQ3UZW7 335 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Nr1d2Q60674 576 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Apex2Q68G58 516 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Trim17Q7TPM3 477 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Rcor1Q8CFE3 480 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Glis1Q8K1M4 789 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gtf2a1lQ8R4I4 468 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Spon1Q8VCC9 807 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Clstn3Q99JH7 956 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Dhrs1Q99L04 313 aa15.88■□□□□ 0.13
Trim28-201ENSMUST00000005705 Mcm8Q9CWV1 833 aa15.88■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms