RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Olfr566A0A1B0GST0 319 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Sppl2cA2A6C4 690 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Man1b1A2AJ15 658 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cylc2B1AWN8 422 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn2r118E9Q1C1 853 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gm2237E9Q501 211 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gm3591K7N6X2 186 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 H2-M9O19442 342 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Scrg1O88745 98 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Znf703P0CL69 594 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 SmoP56726 793 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Kcnab2P62482 367 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 PrkczQ02956 592 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Spata6Q3U6K5 488 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 PtprnQ60673 979 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ptov1Q91VU8 416 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Fcf1Q9CTH6 198 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pin4Q9CWW6 131 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Q9D937 123 aaKnown RBP18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cldn8Q9Z260 225 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Kcna10B2RQA1 511 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Tsga10ipF7A1F0 157 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rgs4O08899 205 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gnpda1O88958 289 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 P01878 344 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gabarapl2P60521 117 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 A630001G21RikQ3UTB2 229 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Plk5Q4FZD7 595 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Map2k2Q63932 401 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Paqr3Q6TCG8 311 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cyp20a1Q8BKE6 462 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rbm4Q8C7Q4 361 aaKnown RBP18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn1r84Q8R284 318 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rbm4bQ8VE92 357 aaKnown RBP18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olfr448Q8VES9 310 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 AclyQ91V92 1091 aaKnown RBP18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 RhoaQ9QUI0 193 aa18.35■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Zfp964B2RR88 472 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Krt83E9Q1Y9 479 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 TpmtO55060 240 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ppm1aP49443 382 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Drd4P51436 387 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Entpd1P55772 510 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cyp2c37P56654 490 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Arhgap39P59281 1107 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Dnal1Q05A62 190 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 A1bgQ19LI2 512 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Scn4bQ7M729 228 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olfr301Q7TS04 311 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rap2aQ80ZJ1 183 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Zfp418Q8BFS8 652 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Fndc3aQ8BX90 1198 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Wdr47Q8CGF6 920 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ppp1r8Q8R3G1 351 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Mcm8Q9CWV1 833 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 PgcQ9D7R7 392 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ccdc70Q9D9B0 223 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Aff4Q9ESC8 1160 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Wdr12Q9JJA4 423 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Nipsnap3aB1AWZ3 247 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Hoxd8P23463 289 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Zdhhc11Q14AK4 347 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Hk3Q3TRM8 922 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ppm1nQ8BGL1 404 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pgs1Q8BHF7 553 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Hs3st5Q8BSL4 346 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 C5ar2Q8BW93 344 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Arel1Q8CHG5 823 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ugt2b34Q8K154 532 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Kat8Q9D1P2 458 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rdh11Q9QYF1 316 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Slc25a14Q9Z2B2 325 aa18.34■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Smok4aA0JLX3 433 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Btnl6A2CG22 539 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Elovl3O35949 271 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 NficP70255 439 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Usp39Q3TIX9 564 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Eif2b4Q61749 524 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pdcd4Q61823 469 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Dmc1Q61880 340 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 KdsrQ6GV12 332 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olfr538Q7TRT5 310 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rbbp8Q80YR6 893 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Slc49a3Q8CE47 516 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ca12Q8CI85 354 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Appl1Q8K3H0 707 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rbms2Q8VC70 383 aaKnown RBP18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Mri1Q9CQT1 369 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Q9CR55 154 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Dsn1Q9CYC5 348 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Fundc2Q9D6K8 151 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Apbb2Q9DBR4 760 aa18.33■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olfr625-ps1A0A140T8L4 321 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Pole2O54956 527 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Cyp1a1P00184 524 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 MndaP0DOV1 425 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Nudt2P56380 147 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Isl1P61372 349 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Rplp2P99027 115 aaKnown RBP18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Naa11Q3UX61 218 aa18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms