RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 IrgcQ8C262 412 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Cadm1Q8R5M8 456 aaKnown RBP16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr345Q8VGK4 311 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr1353Q8VGU8 309 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Mrpl9Q99N94 265 aaKnown RBP16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Chaf1bQ9D0N7 572 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Phf10Q9D8M7 497 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Nipa2Q9JJC8 359 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Plin4O88492 1403 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Sec14l5B2RXM5 696 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn2r125D3Z3M1 369 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Acbd4E9Q289 327 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm11239E9Q5Z9 360 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm11237F2Z3W5 360 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm11238F2Z478 360 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Znf143O70230 638 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Cyp2c65Q148B1 490 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Zmym5Q3U2E2 627 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm428Q3UTE2 360 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm11487Q5RIS0 354 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Bhlha9Q5RJB0 231 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Phf12Q5SPL2 1003 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Cpa6Q5U901 438 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Bcas1Q80YN3 633 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Klhl42Q8BFQ9 493 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Kyat1Q8BTY1 424 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr697Q8VFM4 317 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Ptgr1Q91YR9 329 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Ndufb5Q9CQH3 189 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Ly6kQ9CWP4 154 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Ribc2Q9D4Q1 309 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 TheglQ9DA15 459 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Dnajb9Q9QYI6 222 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 HgfacQ9R098 653 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Katna1Q9WV86 491 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 PtprdQ64487 1912 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Scn5aQ9JJV9 2019 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr376E9Q4M1 320 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Maml2F6U238 1170 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm20441G3UYJ7 252 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 H2-Q8P14430 326 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Acsl1P41216 699 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 FpgsP48760 587 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 H2-Q6P79568 326 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Q6P2K3 674 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Tmem202Q80W35 275 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Npas4Q8BGD7 802 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Serpinb9dQ8BMT0 377 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Fignl1Q8BPY9 683 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Chst8Q8BQ86 417 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Csnk1g3Q8C4X2 424 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 CcsapQ8QZT2 252 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Lsm1Q8VC85 133 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Dapk2Q8VDF3 370 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Spesp1Q9D5A0 399 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Ppil6Q9D6D8 278 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Mkrn2Q9ERV1 416 aaKnown RBP16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Fhl5Q9WTX7 284 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Fth1P09528 182 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Ugt2b17P17717 530 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Gria1P23818 907 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 HmgclP38060 325 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Vps26aP40336 327 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Kcnk2P97438 426 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Cry1P97784 606 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Dmrtc1bQ2PMX6 267 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Gdpgp1Q3TLS3 386 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Ppp1r14bQ62084 147 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Pfkfb4Q6DTY7 469 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Kif18bQ6PFD6 834 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 H2-M10.2Q85ZW9 329 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Zfp595Q8BIN6 625 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Rdh12Q8BYK4 316 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Slc29a4Q8R139 528 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Taf12Q8VE65 161 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Ugt2b38Q91WH2 530 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Zfp773Q9CZ29 471 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Efhc2Q9D485 750 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Umodl1Q5DID3 1319 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Tp53bp1P70399 1969 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Ighv11-1A0A075B5R6 117 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Kcna10B2RQA1 511 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Hk2O08528 917 aaKnown RBP16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Cmpk2Q3U5Q7 447 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Zfp560Q3URI6 754 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 BadQ61337 204 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Foxj1Q61660 421 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Vwa2Q70UZ7 791 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Gpr22Q8BZL4 432 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Adnp2Q8CHC8 1165 aaKnown RBP16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Actr8Q8R2S9 624 aaKnown RBP16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Klrb1fQ8VD98 217 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Golga7Q91W53 137 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Ilf2Q9CXY6 390 aaKnown RBP16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Aff4Q9ESC8 1160 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Wdr12Q9JJA4 423 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 DguokQ9QX60 277 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Trip4Q9QXN3 581 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Smarcb1Q9Z0H3 385 aa16.08■□□□□ 0.16
Shh-201ENSMUST00000002708 Olfr1006A2ALD2 312 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms