RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	SEC22B	O75396	215 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	CREG1	O75629	220 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	PCMT1	P22061	227 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	CORO1A	P31146	461 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	IDUA	P35475	653 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	GP2	P55259	537 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	IGFN1	Q86VF2	1251 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	AADAT	Q8N5Z0	425 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	OR6K2	Q8NGY2	324 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	CNIH3	Q8TBE1	160 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	CHPT1	Q8WUD6	406 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	CCDC138	Q96M89	665 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	RDH12	Q96NR8	316 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	EGFL8	Q99944	293 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	RBM4B	Q9BQ04	359 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	RBM4	Q9BWF3	364 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	GPR63	Q9BZJ6	419 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	RAD21L1	Q9H4I0	556 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	VNN3	Q9NY84	501 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	USE1	Q9NZ43	259 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	SELENON	Q9NZV5	590 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	PKP3	Q9Y446	797 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	TRBV5-3	A0A0A0MS03	114 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	SLC1A7	O00341	560 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	RGS14	O43566	566 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	FZD6	O60353	706 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	ULK1	O75385	1050 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	STC2	O76061	302 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	SLC25A14	O95258	325 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	GLUD1	P00367	558 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	IRF1	P10914	325 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	HMGCL	P35914	325 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	OPRL1	P41146	370 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	GNPDA1	P46926	289 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	ZNF157	P51786	506 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	CYP2A13	Q16696	494 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	SLC44A4	Q53GD3	710 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	DET1	Q7L5Y6	550 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	DCP2	Q8IU60	420 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	IQCF2	Q8IXL9	164 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	NCLN	Q969V3	563 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	MUL1	Q969V5	352 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	OR52E6	Q96RD3	313 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	ZBTB18	Q99592	522 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	RNF38	Q9H0F5	515 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	CLMP	Q9H6B4	373 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	LHX3	Q9UBR4	397 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	BAG5	Q9UL15	447 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	ERGIC3	Q9Y282	383 aa		13.54	□□□□□ -0.24
PHGDH-233	ENST00000642021	C16orf96	A6NNT2	1141 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	CFAP99	D6REC4	459 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021		K7ERQ8	282 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	SERPINA1	P01009	418 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	S100B	P04271	92 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	GZMM	P51124	257 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	FOXD4	Q12950	439 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	CRHR2	Q13324	411 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	CTF1	Q16619	201 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	MFSD14C	Q5VZR4	134 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	ZNF551	Q7Z340	670 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	ANKRD46	Q86W74	232 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	RASAL3	Q86YV0	1011 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	MICU2	Q8IYU8	434 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	SLC22A15	Q8IZD6	547 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	STK40	Q8N2I9	435 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	CD244	Q9BZW8	370 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	CCDC90B	Q9GZT6	254 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	ANGPTL3	Q9Y5C1	460 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	ZNF840P	A6NDX5	716 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	SCEL	O95171	688 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	PRAMEF1	O95521	474 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	MYCLP1	P12525	358 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	BCKDHA	P12694	445 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	POR	P16435	677 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	FLT3LG	P49771	235 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	BCAP31	P51572	246 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	CBX3	Q13185	183 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	SPIDR	Q14159	915 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	EGFLAM	Q63HQ2	1017 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	LAIR1	Q6GTX8	287 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	GPR149	Q86SP6	731 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	IFNL1	Q8IU54	200 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	PLPP6	Q8IY26	295 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	NEURL2	Q9BR09	285 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	INPP5K	Q9BT40	448 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	CLPB	Q9H078	707 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	TNKS2	Q9H2K2	1166 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	LRTM1	Q9HBL6	345 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	OPTC	Q9UBM4	332 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	GNPTG	Q9UJJ9	305 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	DLGAP4	Q9Y2H0	992 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021	OARD1	Q9Y530	152 aa		13.53	□□□□□ -0.24
PHGDH-233	ENST00000642021		A0A1B0GVM2	712 aa		13.52	□□□□□ -0.24
PHGDH-233	ENST00000642021	TOR1B	O14657	336 aa		13.52	□□□□□ -0.24
PHGDH-233	ENST00000642021	IL6	P05231	212 aa		13.52	□□□□□ -0.24
PHGDH-233	ENST00000642021	RPL17	P18621	184 aa	Known RBP	13.52	□□□□□ -0.24
PHGDH-233	ENST00000642021	MSH3	P20585	1137 aa		13.52	□□□□□ -0.24
PHGDH-233	ENST00000642021	SLC11A1	P49279	550 aa		13.52	□□□□□ -0.24
PHGDH-233	ENST00000642021	NKX3-2	P78367	333 aa		13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms