RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 EPB42P16452 691 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 PSMB9P28065 219 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 SF1Q15637 639 aaKnown RBP14.29□□□□□ -0.12
SCARB2-221ENST00000640341 IRAK1BP1Q5VVH5 260 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 Q6ZNX1 250 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 ANKS3Q6ZW76 656 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 CHDHQ8NE62 594 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-221ENST00000640341 ZNF548Q8NEK5 533 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-221ENST00000640341 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 PSME2Q9UL46 239 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 DLGAP4Q9Y2H0 992 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 TRIM64CA6NLI5 447 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 AXIN1O15169 862 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 MTX2O75431 263 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 CREG1O75629 220 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 TACR1P25103 407 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 AQP1P29972 269 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 SMAD3P84022 425 aaKnown RBP14.29□□□□□ -0.12
SCARB2-221ENST00000640341 DPP10Q8N608 796 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 WFDC5Q8TCV5 224 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 SCN4AP35499 1836 aa14.29□□□□□ -0.12
SCARB2-221ENST00000640341 ILVBLA1L0T0 632 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ANKRD28O15084 1053 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 FUCA1P04066 466 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 C7P10643 843 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ITPKAP23677 461 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 HTR1BP28222 390 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 CSKP41240 450 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 KPNA1P52294 538 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 RAPSNQ13702 412 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 BOP1Q14137 746 aaKnown RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 DHRS4L2Q6PKH6 230 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 TSPAN33Q86UF1 283 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ASIC4Q96FT7 647 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 APOLD1Q96LR9 279 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 NODALQ96S42 347 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 MBOAT4Q96T53 435 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ZNF840PA6NDX5 716 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 MANSC4A6NHS7 340 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 BCKDHAP12694 445 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 S100A3P33764 101 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 OPRL1P41146 370 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 CD300CQ08708 224 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 CHRNA6Q15825 494 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 SMN1Q16637 294 aaKnown RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 TRIM16LQ309B1 348 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ADGRF1Q5T601 910 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 DCDC5Q6ZRR9 648 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 MSRB3Q8IXL7 192 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ARL10Q8N8L6 244 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ITFG2Q969R8 447 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 MYO19Q96H55 970 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 TTPALQ9BTX7 342 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ATG10Q9H0Y0 220 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ELOVL6Q9H5J4 265 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 TRPM5Q9NZQ8 1165 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 DAPK2Q9UIK4 370 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 C3orf18Q9UK00 162 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 SCN10AQ9Y5Y9 1956 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 FAM92AA1XBS5 289 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 PER2O15055 1255 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 BCAS1O75363 584 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 CPSF4O95639 269 aaKnown RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ITGALP20701 1170 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 DCTP40126 519 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 CDKN2CP42773 168 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 AQP6Q13520 282 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 TSTA3Q13630 321 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
SCARB2-221ENST00000640341 DOK6Q6PKX4 331 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 ANGPTL8Q6UXH0 198 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 STK40Q8N2I9 435 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 LEMD2Q8NC56 503 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 RAB2BQ8WUD1 216 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 SLC22A12Q96S37 553 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 C1QTNF3Q9BXJ4 246 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 MARCH5Q9NX47 278 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 CD84Q9UIB8 345 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 VPS51Q9UID3 782 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 BLOC1S6Q9UL45 172 aa14.28□□□□□ -0.12
SCARB2-221ENST00000640341 TMEM247A6NEH6 219 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 ZNF701M0R085 212 aaPredicted RBP14.27□□□□□ -0.12
SCARB2-221ENST00000640341 CLPXO76031 633 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 FADS2O95864 444 aaKnown RBP14.27□□□□□ -0.12
SCARB2-221ENST00000640341 CD160O95971 181 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 MSH3P20585 1137 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 ACLYP53396 1101 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 VBP1P61758 197 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 ZXDBP98169 803 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 OCA2Q04671 838 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 CBX3Q13185 183 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 RGS21Q2M5E4 152 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 SPOUT1Q5T280 376 aaKnown RBP14.27□□□□□ -0.12
SCARB2-221ENST00000640341 ZCCHC8Q6NZY4 707 aaKnown RBP14.27□□□□□ -0.12
SCARB2-221ENST00000640341 SLCO6A1Q86UG4 719 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 ADHFE1Q8IWW8 467 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 MICU2Q8IYU8 434 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms