RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-238ENST00000638514 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 LINC01465Q8N7H1 131 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 AMER2Q8N7J2 671 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 ZNF548Q8NEK5 533 aaPredicted RBP13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 SCAMP5Q8TAC9 235 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 TMEM40Q8WWA1 233 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 NCLNQ969V3 563 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 EXOC2Q96KP1 924 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 PAAF1Q9BRP4 392 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 SP110Q9HB58 689 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 ADPRHL2Q9NX46 363 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 ZNF112Q9UJU3 913 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 GMPPBQ9Y5P6 360 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 ZNF236Q9UL36 1845 aa13.41□□□□□ -0.26
KCNMA1-238ENST00000638514 RRN3P2A6NIE6 340 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 CENPXA8MT69 81 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 CXCR6O00574 342 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 DFNA5O60443 496 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 PGLSO95336 258 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 RPS17P08708 135 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 SLC2A3P11169 496 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 DDR2Q16832 855 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 KDELC1Q6UW63 502 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 STAG3L4Q8TBR4 150 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 PYCR2Q96C36 320 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 RHBDF1Q96CC6 855 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 KLHL5Q96PQ7 755 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 ADAM2Q99965 735 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 ITPAQ9BY32 194 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 ARNT2Q9HBZ2 717 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 NT5MQ9NPB1 228 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 CAB39Q9Y376 341 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 A3GALT2U3KPV4 340 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 A8MX80 341 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 MRPS14O60783 128 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 SCELO95171 688 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 GGT5P36269 586 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 SYT16Q17RD7 645 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 RASSF5Q8WWW0 418 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 TM9SF3Q9HD45 589 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 WBP11Q9Y2W2 641 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 COL1A2P08123 1366 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 ZSWIM8A7E2V4 1837 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 ELOVL7A1L3X0 281 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 GABRDO14764 452 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 TIAL1Q01085 375 aaKnown RBP eCLIP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 KEAP1Q14145 624 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 SMN1Q16637 294 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 TIGD7Q6NT04 549 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 PSD4Q8NDX1 1056 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 SIMC1Q8NDZ2 872 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 TMEM246Q9BRR3 403 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 TBCDQ9BTW9 1192 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 CLPBQ9H078 707 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 PLSCR3Q9NRY6 295 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 VAPAQ9P0L0 249 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 KCNH4Q9UQ05 1017 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 PKP3Q9Y446 797 aa13.4□□□□□ -0.26
KCNMA1-238ENST00000638514 COL4A5P29400 1685 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 IFRD1O00458 451 aaPredicted RBP13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 PNPLA4P41247 253 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 CYP4F3Q08477 520 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 CAPN13Q6MZZ7 669 aaPredicted RBP13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 DET1Q7L5Y6 550 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 GPRIN1Q7Z2K8 1008 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 GALNT12Q8IXK2 581 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 KIAA1191Q96A73 305 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 NUAK2Q9H093 628 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 LRFN2Q9ULH4 789 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 PCDHGB6Q9Y5F9 930 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 DNAH12Q6ZR08 3092 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 ERVH48-1M5A8F1 160 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 ECI2O75521 394 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 HTR3AP46098 478 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 SOX4Q06945 474 aaPredicted RBP13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 PON2Q15165 354 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 BRMS1LQ5PSV4 323 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 C10orf120Q5SQS8 335 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 THEM5Q8N1Q8 247 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 LSMEM1Q8N8F7 131 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 FBXL12Q9NXK8 326 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 ZNF225Q9UK10 706 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 MLYCDO95822 493 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 G6PDP11413 515 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 LILRA4P59901 499 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 GBX1Q14549 363 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 FAM214AQ32MH5 1076 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 CYP4Z1Q86W10 505 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 NLGN4XQ8N0W4 816 aa13.39□□□□□ -0.27
KCNMA1-238ENST00000638514 NUDT8Q8WV74 236 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms