RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CDK18Q07002 472 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTSD-208ENST00000636843 WASHC5Q12768 1159 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 LACTB2Q53H82 288 aaPredicted RBP12.34□□□□□ -0.43
CTSD-208ENST00000636843 AGAP9Q5VTM2 703 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 C16orf46Q6P387 395 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 ABRAXAS1Q6UWZ7 409 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 ZNF567Q8N184 647 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 AGGF1Q8N302 714 aaeCLIP12.34□□□□□ -0.43
CTSD-208ENST00000636843 OTUD6BQ8N6M0 293 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 GSDMBQ8TAX9 411 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 TADA1Q96BN2 335 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 MRRFQ96E11 262 aaKnown RBP12.34□□□□□ -0.43
CTSD-208ENST00000636843 ABHD17AQ96GS6 310 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 TGM7Q96PF1 710 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 ZNF768Q9H5H4 540 aaKnown RBP12.34□□□□□ -0.43
CTSD-208ENST00000636843 ZNF71Q9NQZ8 489 aaPredicted RBP12.34□□□□□ -0.43
CTSD-208ENST00000636843 EPHA6Q9UF33 1036 aa12.34□□□□□ -0.43
CTSD-208ENST00000636843 NBASA2RRP1 2371 aa12.33□□□□□ -0.43
CTSD-208ENST00000636843 A0A1W2PPM1 405 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 SDR42E2A6NKP2 422 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 ERI2A8K979 691 aaKnown RBP12.33□□□□□ -0.44
CTSD-208ENST00000636843 TCP11X1B4DZS4 312 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 TM9SF1O15321 606 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 KCNJ13O60928 360 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 SPAG7O75391 227 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 NDST3O95803 873 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 MT-ND3P03897 115 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 ZNF28P17035 718 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 VCLP18206 1134 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 KRT4P19013 534 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 IDSP22304 550 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 UBAP2LQ14157 1087 aaKnown RBP12.33□□□□□ -0.44
CTSD-208ENST00000636843 STEAP4Q687X5 459 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 ITPRIPL1Q6GPH6 555 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 CYB5D1Q6P9G0 228 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 UNC5AQ6ZN44 842 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 RGS9BPQ6ZS82 235 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 PID1Q7Z2X4 250 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 PRSS42Q7Z5A4 293 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 GDAP1Q8TB36 358 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 KLHL6Q8WZ60 621 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 STAMBPL1Q96FJ0 436 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 ZDHHC12Q96GR4 267 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 VPS35Q96QK1 796 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 OR6C1Q96RD1 312 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 PLCD4Q9BRC7 762 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 KLHL8Q9P2G9 620 aaPredicted RBP12.33□□□□□ -0.44
CTSD-208ENST00000636843 DNAJC16Q9Y2G8 782 aa12.33□□□□□ -0.44
CTSD-208ENST00000636843 MYO1CO00159 1063 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 PSMD3O43242 534 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 RASSF9O75901 435 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 SLC4A1P02730 911 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 C1QAP02745 245 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 F8A1P23610 371 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 PTPN3P26045 913 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 PSMB4P28070 264 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 DLSTP36957 453 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 CAPZBP47756 277 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 LEPRP48357 1165 aaKnown RBP12.32□□□□□ -0.44
CTSD-208ENST00000636843 SEPHS1P49903 392 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 SERPINB9P50453 376 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 WDR4P57081 412 aaKnown RBP12.32□□□□□ -0.44
CTSD-208ENST00000636843 IFT88Q13099 833 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 NAB1Q13506 487 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
CTSD-208ENST00000636843 PCSK7Q16549 785 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 PLA2G4EQ3MJ16 856 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 ATP1A1-AS1Q5TC04 95 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 HHATQ5VTY9 493 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 CACHD1Q5VU97 1274 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 CCDC121Q6ZUS5 278 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 RASGRP3Q8IV61 690 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 ZNF547Q8IVP9 402 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 GALNT6Q8NCL4 622 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 BRSK1Q8TDC3 778 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 CXorf40BQ96DE9 158 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 MTBPQ96DY7 904 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 CEP41Q9BYV8 373 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 RAB33BQ9H082 229 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 GLOD4Q9HC38 313 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 SLC40A1Q9NP59 571 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 ANKMY1Q9P2S6 941 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 KCND3Q9UK17 655 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 CROTQ9UKG9 612 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 POLHQ9Y253 713 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 MRPS18BQ9Y676 258 aaKnown RBP12.32□□□□□ -0.44
CTSD-208ENST00000636843 KCNMB2Q9Y691 235 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 FAM159BA6NKW6 160 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 MKRN2OSH3BPM6 223 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 AP3B1O00203 1094 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 SNX3O60493 162 aa12.32□□□□□ -0.44
CTSD-208ENST00000636843 MTX2O75431 263 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms