RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 USP16Q9Y5T5 823 aa4.92□□□□□ -1.62
TRAPPC9-216ENST00000634178 ASTN2O75129 1339 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC9-216ENST00000634178 LAMB4A4D0S4 1761 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 HTR3EA5X5Y0 456 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 CGB1A6NKQ9 187 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 FAM90A26D6RGX4 464 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 I6L893 689 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 OVOL3O00110 214 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 TIMM23O14925 209 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SPRY3O43610 288 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 PLPP2O43688 288 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 ZNF217O75362 1048 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GAGE7O76087 117 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SLCO2B1O94956 709 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 KCNK5O95279 499 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SIX3O95343 332 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 CH25HO95992 272 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 PENKP01210 267 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 CELA2AP08217 269 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 FGF2P09038 288 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 HRH2P25021 359 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 PSMA3P25788 255 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 HOXD3P31249 432 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 TLX1P31314 330 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 PLCD1P51178 756 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 CLCNKAP51800 687 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 LIMK1P53667 647 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GAGE1Q13065 139 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GAGE4Q13068 117 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 EFNB3Q15768 340 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 HLFQ16534 295 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SMN1Q16637 294 aaKnown RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 PRTGQ2VWP7 1150 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 TWISTNBQ3B726 338 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 LRIT3Q3SXY7 679 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 PARP10Q53GL7 1025 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 FNBP1LQ5T0N5 605 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 FAM122CQ6P4D5 195 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 MOXD1Q6UVY6 613 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 FAM198BQ6UWH4 519 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SUSD1Q6UWL2 747 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 C11orf57Q6ZUT1 292 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 IRF2BP2Q7Z5L9 587 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 PM20D2Q8IYS1 436 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 NANOGP1Q8N7R0 232 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 TBC1D16Q8TBP0 767 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 UTP15Q8TED0 518 aaKnown RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 ROBO4Q8WZ75 1007 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SLC25A28Q96A46 364 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 LINC00615Q96LM1 132 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 LRRC3BQ96PB8 259 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GPATCH1Q9BRR8 931 aaKnown RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 DESI2Q9BSY9 194 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 WNT5BQ9H1J7 359 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 DPP3Q9NY33 737 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 RCC2Q9P258 522 aaKnown RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 GRIP1Q9Y3R0 1128 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 LIPGQ9Y5X9 500 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 LAMA2P24043 3122 aaKnown RBP4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 ABCC4O15439 1325 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 MAP3K15Q6ZN16 1313 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SCN9AQ15858 1988 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 LAMB2P55268 1798 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 SSC5DA1L4H1 1573 aa4.91□□□□□ -1.62
TRAPPC9-216ENST00000634178 COL1A1P02452 1464 aaPredicted RBP4.9□□□□□ -1.62
TRAPPC9-216ENST00000634178 A0A087WV48 116 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 A0A0B4J293 547 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 A0A0U1RQG5 324 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 J3KR12 359 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 J3QR06 171 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 ANKRD28O15084 1053 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 SLC7A4O43246 635 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 CREG1O75629 220 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 DNASE1P24855 282 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 NF2P35240 595 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 TNNT2P45379 298 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 AMTP48728 403 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 PRMT2P55345 433 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 SP3Q02447 781 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 SRSF4Q08170 494 aaKnown RBP4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 DSC1Q08554 894 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 TRAF2Q12933 501 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 PTK6Q13882 451 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 E2F5Q15329 346 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 C18orf63Q68DL7 685 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 TEX38Q6PEX7 206 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 BRAT1Q6PJG6 821 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 PPP1R21Q6ZMI0 780 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 ZNF534Q76KX8 674 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 ARMC9Q7Z3E5 817 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 PPP1R42Q7Z4L9 355 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 PIM3Q86V86 326 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 NRROSQ86YC3 692 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 TIGD4Q8IY51 512 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 ZNF34Q8IZ26 560 aa4.9□□□□□ -1.63
TRAPPC9-216ENST00000634178 SIX6OS1Q8N1H7 587 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms