RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 GATA6Q92908 595 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 ZDHHC12Q96GR4 267 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 TGM7Q96PF1 710 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 TMEM121BQ9BXQ6 578 aaPredicted RBP19.71■□□□□ 0.75
PTCD3-220ENST00000627371 ACSS3Q9H6R3 686 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 ANKZF1Q9H8Y5 726 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 HRASLS2Q9NWW9 162 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 PCM1Q15154 2024 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 A0A1W2PNU3 283 aaPredicted RBP19.7■□□□□ 0.74
PTCD3-220ENST00000627371 TRABD2BA6NFA1 517 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 MATN2O00339 956 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 PSIP1O75475 530 aaKnown RBP19.7■□□□□ 0.74
PTCD3-220ENST00000627371 PPP1CAP62136 330 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 GRB7Q14451 532 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 C16orf72Q14CZ0 275 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 RTP5Q14D33 572 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 C3orf38Q5JPI3 329 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 SNAP47Q5SQN1 464 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 GRTP1Q5TC63 336 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 IRGCQ6NXR0 463 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 TTC23LQ6PF05 361 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 CYHR1Q6ZMK1 362 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 PIWIL4Q7Z3Z4 852 aaKnown RBP19.7■□□□□ 0.74
PTCD3-220ENST00000627371 ARHGAP22Q7Z5H3 698 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 GSPT2Q8IYD1 628 aaKnown RBP19.7■□□□□ 0.74
PTCD3-220ENST00000627371 WDR36Q8NI36 951 aaKnown RBP19.7■□□□□ 0.74
PTCD3-220ENST00000627371 MAGEC3Q8TD91 643 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 RAD51AP1Q96B01 352 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 NXPE2Q96DL1 559 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 CYTH2Q99418 400 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 GPR22Q99680 433 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 NRTNQ99748 197 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 CMKLR1Q99788 373 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 MENTQ9BUN1 341 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 XKR8Q9H6D3 395 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 KLHL3Q9UH77 587 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 PLAGL1Q9UM63 463 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 SATB2Q9UPW6 733 aa19.7■□□□□ 0.74
PTCD3-220ENST00000627371 BTN3A3O00478 584 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 BTN3A1O00481 513 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 TOX3O15405 576 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-220ENST00000627371 CATP04040 527 aaKnown RBP19.69■□□□□ 0.74
PTCD3-220ENST00000627371 ANKRD34CP0C6C1 535 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 FAM153BP0C7A2 387 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 MYBL2P10244 700 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 POLR2CP19387 275 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-220ENST00000627371 PKLRP30613 574 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 SPRP35270 261 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-220ENST00000627371 RAB28P51157 221 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 TAS2R39P59534 338 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 POU4F1Q01851 419 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 PRKAA1Q13131 559 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 FAM153CQ494X1 144 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 ARMC6Q6NXE6 501 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 TRMT10CQ7L0Y3 403 aaKnown RBP19.69■□□□□ 0.74
PTCD3-220ENST00000627371 RAB11FIP2Q7L804 512 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 PRSS42Q7Z5A4 293 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 RASGRP3Q8IV61 690 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 EEF1AKMT1Q8WVE0 214 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 CD180Q99467 661 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 TXLNGYQ9BZA5 131 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 POLR1BQ9H9Y6 1135 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 OR6C2Q9NZP2 312 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 AKAP7Q9P0M2 348 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-220ENST00000627371 LOXL2Q9Y4K0 774 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 PCDHGA8Q9Y5G5 932 aa19.69■□□□□ 0.74
PTCD3-220ENST00000627371 ARHGEF33A8MVX0 844 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 FAM155BO75949 473 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 TSPAN12O95859 305 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 MPOP05164 745 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 ZNF37AP17032 561 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-220ENST00000627371 SAT1P21673 171 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 LSSP48449 732 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 PGGT1BP53609 377 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 IL2P60568 153 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 GABREP78334 506 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.68■□□□□ 0.74
PTCD3-220ENST00000627371 FAM92BQ6ZTR7 304 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 ADGRF3Q8IZF5 1079 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 FBXO39Q8N4B4 442 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 FBXO15Q8NCQ5 510 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-220ENST00000627371 AGBL5Q8NDL9 886 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 ASB11Q8WXH4 323 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.68■□□□□ 0.74
PTCD3-220ENST00000627371 LINGO1Q96FE5 620 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 RAB11FIP5Q9BXF6 653 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 TWSG1Q9GZX9 223 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 POPDC3Q9HBV1 291 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 POMT2Q9UKY4 750 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 MTO1Q9Y2Z2 717 aaKnown RBP19.68■□□□□ 0.74
PTCD3-220ENST00000627371 FRYQ5TBA9 3013 aa19.68■□□□□ 0.74
PTCD3-220ENST00000627371 FREM2Q5SZK8 3169 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 CHD8Q9HCK8 2581 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 GSAPA4D1B5 854 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 TLCD2A6NGC4 264 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 A8MU76 341 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 GFYI3L273 518 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 RASGRF2O14827 1237 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 PLD2O14939 933 aa19.67■□□□□ 0.74
PTCD3-220ENST00000627371 RASSF9O75901 435 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms