RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 FAM47BQ8NA70 645 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 DNAJB8Q8NHS0 232 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ZFPM2Q8WW38 1151 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 RPL10LQ96L21 214 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 EGFL8Q99944 293 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 TUBA1CQ9BQE3 449 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 CLSTN3Q9BQT9 956 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 FEM1AQ9BSK4 669 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 HGH1Q9BTY7 390 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ADI1Q9BV57 179 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 TNKS2Q9H2K2 1166 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 RPF2Q9H7B2 306 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ELOVL2Q9NXB9 296 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 USE1Q9NZ43 259 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 LUZP4Q9P127 313 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 GNGT2O14610 69 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 STX7O15400 261 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 TSPAN6O43657 245 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 NCK1P16333 377 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 PCSK6P29122 969 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 CA5AP35218 305 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 NRIP1P48552 1158 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 GRSF1Q12849 480 aaKnown RBP eCLIP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ZNF177Q13360 481 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 PWP1Q13610 501 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 GRIN2CQ14957 1233 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 MPP7Q5T2T1 576 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 PATL1Q86TB9 770 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 DENND1CQ8IV53 801 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 CPXM2Q8N436 756 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 CDYL2Q8N8U2 506 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 FNDC5Q8NAU1 212 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ST13P5Q8NFI4 369 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ZNF420Q8TAQ5 688 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 PNPT1Q8TCS8 783 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ECHDC3Q96DC8 303 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 RMND5BQ96G75 393 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 PHOX2BQ99453 314 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 HERC2P3Q9BVR0 1158 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 ATXN10Q9UBB4 475 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 FAM8A1Q9UBU6 413 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 CIDEBQ9UHD4 219 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 MAN2B2Q9Y2E5 1009 aa7.03□□□□□ -1.28
CTNNA1-244ENST00000627109 A0A0U1RQS6 177 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CCDC154A6NI56 674 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 GSTA4O15217 222 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 SNAP91O60641 907 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 NOL3O60936 208 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CBSLP0DN79 551 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 NFKBIAP25963 317 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 VARSP26640 1264 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 DCKP27707 260 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CBSP35520 551 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 HSD17B7P56937 341 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 C21orf58P58505 322 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CTBSQ01459 385 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 ZBED5Q49AG3 693 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 TIGD2Q4W5G0 525 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 PYCR3Q53H96 274 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 LRIF1Q5T3J3 769 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 LPCAT2Q7L5N7 544 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 SAMD14Q8IZD0 417 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CBR4Q8N4T8 237 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 OR52B6Q8NGF0 335 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 ZNF461Q8TAF7 563 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 SMIM14Q96QK8 99 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 LIN28AQ9H9Z2 209 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CHCHD3Q9NX63 227 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 RSL24D1Q9UHA3 163 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 AP3M1Q9Y2T2 418 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 PCDHGC4Q9Y5F7 938 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 MTCL1Q9Y4B5 1905 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 F5P12259 2224 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 KCNE1BA0A087WTH5 132 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 PRMT5O14744 637 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 RSL1D1O76021 490 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 OR4F21O95013 312 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 PRAMEF12O95522 483 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CLIC3O95833 236 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 MTHFD1P11586 935 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 ACRV1P26436 265 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 IRS1P35568 1242 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CAPGP40121 348 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 ERVFC1P60507 584 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 PRKG2Q13237 762 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 RABL3Q5HYI8 236 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 RNF219Q5W0B1 726 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 SNX20Q7Z614 316 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 MSRB3Q8IXL7 192 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 CPNE9Q8IYJ1 553 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 GLB1L3Q8NCI6 653 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 MAGEE2Q8TD90 523 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 BIRC7Q96CA5 298 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 ZNF583Q96ND8 569 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 ACOX2Q99424 681 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 NPLQ9BXD5 320 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC29A3Q9BZD2 475 aa7.02□□□□□ -1.29
CTNNA1-244ENST00000627109 ING2Q9H160 280 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms