RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 IQCF5A8MTL0 148 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 MASP2O00187 686 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 MATN2O00339 956 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 SORBS2O94875 1100 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 GOT2P00505 430 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 CHRM5P08912 532 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 CCR7P32248 378 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 NSG1P42857 185 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 GCGRP47871 477 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 GSDMDP57764 484 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 PRKAA1Q13131 559 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 ITIH4Q14624 930 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 P3H1Q32P28 736 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 TSTD2Q5T7W7 516 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 LDB1Q86U70 411 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 UBL4BQ8N7F7 174 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 TEX19Q8NA77 164 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 Q8NA96 180 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 LINC01555Q8NAE3 123 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 C1orf54Q8WWF1 131 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 THAP4Q8WY91 577 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 ELMO1Q92556 727 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 CLIP3Q96DZ5 547 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 CASS4Q9NQ75 786 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 MARCH4Q9P2E8 410 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 IMPACTQ9P2X3 320 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 KLHL20Q9Y2M5 609 aa13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 PCDHGA9Q9Y5G4 932 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-241ENST00000626948 KRT87PA6NCN2 255 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 C2orf74A8MZ97 194 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 LIN7AO14910 233 aaPredicted RBP13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 IPO7O95373 1038 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 ZSCAN5DPP0CG00 497 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 ITGAXP20702 1163 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 CETN2P41208 172 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 NCF4Q15080 339 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 PRR30Q53SZ7 412 aaPredicted RBP13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 C19orf47Q8N9M1 422 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 FDCSPQ8NFU4 85 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 OR5K2Q8NHB8 316 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 RANBP9Q96S59 729 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 AP1M1Q9BXS5 423 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 SLC22A11Q9NSA0 550 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 ASF1AQ9Y294 204 aa13.06□□□□□ -0.32
SOX2-OT-241ENST00000626948 ANKRD12Q6UB98 2062 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 GPC4O75487 556 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 TMEM63AO94886 807 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 KLK3P07288 261 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 GSTM1P09488 218 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 RNF224P0DH78 156 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 CYP2A7P20853 494 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 GSTM4Q03013 218 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 CDH17Q12864 832 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 ATP1A4Q13733 1029 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 SLC13A5Q86YT5 568 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 TBC1D21Q8IYX1 336 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 SYCE1Q8N0S2 351 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 KRT222Q8N1A0 295 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 DNAJC22Q8N4W6 341 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 SPC24Q8NBT2 197 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 GBP5Q96PP8 586 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 PSMG3-AS1Q96PY0 264 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 SLC25A23Q9BV35 468 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 VPS37BQ9H9H4 285 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 SYTL2Q9HCH5 934 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 DHCR7Q9UBM7 475 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 SNX7Q9UNH6 387 aa13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 TDRKHQ9Y2W6 561 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 SPTAN1Q13813 2472 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-241ENST00000626948 E7EQ34 232 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 ZNF185O15231 689 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 PSMD3O43242 534 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 IFNB1P01574 187 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 ARNTP27540 789 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 PKLRP30613 574 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 RPL22P35268 128 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 CRADDP78560 199 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 SNX1Q13596 522 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 C1orf189Q5VU69 101 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 LINC00523Q86TU6 105 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 SLC22A15Q8IZD6 547 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 C2orf73Q8N5S3 287 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 RBMXL3Q8N7X1 1067 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 OR4L1Q8NH43 312 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 SEC14L1Q92503 715 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 IL17FQ96PD4 163 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 CHRNA10Q9GZZ6 450 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 FANCEQ9HB96 536 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 ACSS2Q9NR19 701 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 CHRAC1Q9NRG0 131 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 RAB6BQ9NRW1 208 aa13.04□□□□□ -0.32
SOX2-OT-241ENST00000626948 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms