RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 BPIFA3Q9BQP9 254 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 NDC1Q9BTX1 674 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 FICDQ9BVA6 458 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 OR52A5Q9H2C5 316 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 MVB12BQ9H7P6 319 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 OLAHQ9NV23 265 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 RSPH14Q9UHP6 348 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 ICKQ9UPZ9 632 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 SNRNP200O75643 2136 aaKnown RBP14.15□□□□□ -0.14
PNKP-218ENST00000625299 CCDC78A2IDD5 438 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 HEATR9A2RTY3 570 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 H3BMH7 237 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 AGTP01019 485 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 ATP1B2P14415 290 aaPredicted RBP14.15□□□□□ -0.14
PNKP-218ENST00000625299 TLR1Q15399 786 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 ZNF449Q6P9G9 518 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 MFSD7Q6UXD7 560 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 LINC00696Q6ZRV3 163 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 SHISA6Q6ZSJ9 500 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 BZW1Q7L1Q6 419 aaKnown RBP14.15□□□□□ -0.14
PNKP-218ENST00000625299 VSIG1Q86XK7 387 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 COG1Q8WTW3 980 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 TFGQ92734 400 aaPredicted RBP14.15□□□□□ -0.14
PNKP-218ENST00000625299 ULK4Q96C45 1275 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 HAUS1Q96CS2 278 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 NENFQ9UMX5 172 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 PDZD2O15018 2839 aa14.15□□□□□ -0.14
PNKP-218ENST00000625299 A0A0J9YY10 115 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 CST8O60676 142 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 JRKO75564 520 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 STSP08842 583 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 ITGALP20701 1170 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 MMP11P24347 488 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 GABRA4P48169 554 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 NR2C2P49116 596 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 KCNK10P57789 538 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 OLIG2Q13516 323 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 BOP1Q14137 746 aaKnown RBP14.14□□□□□ -0.15
PNKP-218ENST00000625299 TAF1AQ15573 450 aaPredicted RBP14.14□□□□□ -0.15
PNKP-218ENST00000625299 B3GNTL1Q67FW5 361 aaPredicted RBP14.14□□□□□ -0.15
PNKP-218ENST00000625299 TLDC1Q6P9B6 456 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 UNC5AQ6ZN44 842 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 GDF7Q7Z4P5 450 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 NXPE1Q8N323 547 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 BCORP1Q8N888 145 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 OR5AR1Q8NGP9 310 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 OR13C4Q8NGS5 318 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 OR2A14Q96R47 310 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 SLX1AQ9BQ83 275 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 APOL2Q9BQE5 337 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 VPS37BQ9H9H4 285 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 SLC22A11Q9NSA0 550 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 SPHK1Q9NYA1 384 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 CAPN11Q9UMQ6 739 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 TDRKHQ9Y2W6 561 aaKnown RBP14.14□□□□□ -0.15
PNKP-218ENST00000625299 LUC7L2Q9Y383 392 aaKnown RBP14.14□□□□□ -0.15
PNKP-218ENST00000625299 HYOU1Q9Y4L1 999 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 AKAP9Q99996 3911 aa14.14□□□□□ -0.15
PNKP-218ENST00000625299 C17orf113A0A1B0GUU1 675 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 CCL22O00626 93 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 SOCS6O14544 535 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 CHRM5P08912 532 aaPredicted RBP14.13□□□□□ -0.15
PNKP-218ENST00000625299 SHMT2P34897 504 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 CD151P48509 253 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 XIAPP98170 497 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 OTUD4Q01804 1114 aaKnown RBP14.13□□□□□ -0.15
PNKP-218ENST00000625299 TFDP2Q14188 446 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 IGFL2Q6UWQ7 119 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 CLEC17AQ6ZS10 378 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 TTLL10Q6ZVT0 673 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 MICALCLQ6ZW33 695 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 CATSPER1Q8NEC5 780 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 SLC35G2Q8TBE7 412 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 THOC3Q96J01 351 aaKnown RBP14.13□□□□□ -0.15
PNKP-218ENST00000625299 LURAP1Q96LR2 239 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 LHPPQ9H008 270 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 SOX17Q9H6I2 414 aaPredicted RBP14.13□□□□□ -0.15
PNKP-218ENST00000625299 DDX56Q9NY93 547 aaKnown RBP14.13□□□□□ -0.15
PNKP-218ENST00000625299 PLAGL1Q9UM63 463 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 PKDREJQ9NTG1 2253 aa14.13□□□□□ -0.15
PNKP-218ENST00000625299 TRGV8A0A0C4DH27 118 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 ISM1B1AKI9 464 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 TMEM253P0C7T8 217 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 GEMP55040 296 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 ART3Q13508 389 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 BRD3Q15059 726 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 RBBP7Q16576 425 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 TUBB8Q3ZCM7 444 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 SNX20Q7Z614 316 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 FAM20CQ8IXL6 584 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 OR1N1Q8NGS0 311 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 HEXDCQ8WVB3 486 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 P3H4Q92791 437 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 DLG3Q92796 817 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 GBP4Q96PP9 640 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 VAT1Q99536 393 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 SUCOQ9UBS9 1254 aaKnown RBP14.12□□□□□ -0.15
PNKP-218ENST00000625299 PLCL2Q9UPR0 1127 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 ASF1AQ9Y294 204 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms