RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CST6Q15828 149 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 AP5B1Q2VPB7 878 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 POM121L1PQ3SYA9 428 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 FBXO48Q5FWF7 155 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 IRAK1BP1Q5VVH5 260 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 ZNF776Q68DI1 518 aaPredicted RBP15.96■□□□□ 0.15
LDB3-208ENST00000623007 FUNDC1Q8IVP5 155 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 ZNF513Q8N8E2 541 aaPredicted RBP15.96■□□□□ 0.15
LDB3-208ENST00000623007 SNX31Q8N9S9 440 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 PHC3Q8NDX5 983 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 HM13Q8TCT9 377 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 SLC26A7Q8TE54 656 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 CCDC124Q96CT7 223 aaKnown RBP15.96■□□□□ 0.15
LDB3-208ENST00000623007 P2RY13Q9BPV8 354 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 C1QTNF7Q9BXJ2 289 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 ITM2CQ9NQX7 267 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 BPTFQ12830 3046 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 LOC730098B7Z3J9 87 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 ARNTLO00327 626 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 MANBAO00462 879 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 FBP2O00757 339 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 NVLO15381 856 aaKnown RBP15.95■□□□□ 0.14
LDB3-208ENST00000623007 MAP3K7O43318 606 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 MTX2O75431 263 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 RPN2P04844 631 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 PRPS2P11908 318 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 HSD3B1P14060 373 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 HSD3B2P26439 372 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 HNF4AP41235 474 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 POLR2JP52435 117 aaKnown RBP15.95■□□□□ 0.14
LDB3-208ENST00000623007 BNIP2Q12982 314 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 PTCHD3Q3KNS1 767 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 TCHHL1Q5QJ38 904 aaPredicted RBP15.95■□□□□ 0.14
LDB3-208ENST00000623007 PIP5KL1Q5T9C9 394 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 UNC5DQ6UXZ4 953 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 CDK15Q96Q40 435 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 KXD1Q9BQD3 176 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 ELOVL6Q9H5J4 265 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 TMEM181Q9P2C4 612 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 KLQ9UEF7 1012 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 ZNF490Q9ULM2 529 aaPredicted RBP15.95■□□□□ 0.14
LDB3-208ENST00000623007 CNOT6Q9ULM6 557 aaKnown RBP15.95■□□□□ 0.14
LDB3-208ENST00000623007 ITM2BQ9Y287 266 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 CLGNO14967 610 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 LINC01565O15544 149 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 MMP20O60882 483 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 KCNJ13O60928 360 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 SOD1P00441 154 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 THOP1P52888 689 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 CSTF3Q12996 717 aaKnown RBP15.95■□□□□ 0.14
LDB3-208ENST00000623007 MUM1Q2TAK8 710 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 EGFLAMQ63HQ2 1017 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 PARM1Q6UWI2 310 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 ZFAND4Q86XD8 727 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 TDHQ8IZJ6 230 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 SFRP1Q8N474 314 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 DPP10Q8N608 796 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 CATSPER1Q8NEC5 780 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 OR2T11Q8NH01 316 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 OR2L2Q8NH16 312 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 REPS1Q96D71 796 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 GPATCH1Q9BRR8 931 aaKnown RBP15.95■□□□□ 0.14
LDB3-208ENST00000623007 EFHD1Q9BUP0 239 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 PLA2G2FQ9BZM2 168 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 C1orf109Q9NX04 203 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 CLEC1BQ9P126 229 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 ABCD2Q9UBJ2 740 aa15.95■□□□□ 0.14
LDB3-208ENST00000623007 MGAT4DA6NG13 374 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 INPP4BO15327 924 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 JUPP14923 745 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 HSD17B2P37059 387 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 GDF5P43026 501 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 CTSCP53634 463 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 CLNS1AP54105 237 aaKnown RBP15.94■□□□□ 0.14
LDB3-208ENST00000623007 MESP2Q0VG99 397 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 CNTN1Q12860 1018 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 CCNIQ14094 377 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 ABRAXAS2Q15018 415 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 KIAA1161Q6NSJ0 714 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 DHDDSQ86SQ9 333 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 TRAPPC5Q8IUR0 188 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 VRK3Q8IV63 474 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 OR2T3Q8NH03 318 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 POP5Q969H6 163 aaKnown RBP15.94■□□□□ 0.14
LDB3-208ENST00000623007 COX14Q96I36 57 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 LRTM1Q9HBL6 345 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 PSMD13Q9UNM6 376 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 CCL27Q9Y4X3 112 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 PTGDR2Q9Y5Y4 395 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 TCF20Q9UGU0 1960 aaKnown RBP15.94■□□□□ 0.14
LDB3-208ENST00000623007 DOCK8Q8NF50 2099 aa15.94■□□□□ 0.14
LDB3-208ENST00000623007 MKI67P46013 3256 aaKnown RBP15.93■□□□□ 0.14
LDB3-208ENST00000623007 ZNF839A8K0R7 811 aa15.93■□□□□ 0.14
LDB3-208ENST00000623007 IL6P05231 212 aa15.93■□□□□ 0.14
LDB3-208ENST00000623007 HSD17B1P14061 328 aa15.93■□□□□ 0.14
LDB3-208ENST00000623007 ACADSP16219 412 aa15.93■□□□□ 0.14
LDB3-208ENST00000623007 NTSR1P30989 418 aa15.93■□□□□ 0.14
LDB3-208ENST00000623007 DIO3P55073 304 aa15.93■□□□□ 0.14
LDB3-208ENST00000623007 CEACAM7Q14002 265 aa15.93■□□□□ 0.14
LDB3-208ENST00000623007 MAP7Q14244 749 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms