RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 ZNF778Q96MU6 729 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 FOPNLQ96NB1 174 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 LRFN5Q96NI6 719 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 C17orf62Q9BQA9 187 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 CARD6Q9BX69 1037 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 RAB11FIP5Q9BXF6 653 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 PITPNM3Q9BZ71 974 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 ACTR5Q9H9F9 607 aaPredicted RBP12.66□□□□□ -0.38
ATRX-208ENST00000622960 TTC7AQ9ULT0 858 aaPredicted RBP12.66□□□□□ -0.38
ATRX-208ENST00000622960 SNX7Q9UNH6 387 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 ICKQ9UPZ9 632 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
ATRX-208ENST00000622960 A0A0J9YY10 115 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 H3BMM5 538 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 PGRMC1O00264 195 aaKnown RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 RFPL1O75677 317 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 CHRM5P08912 532 aaPredicted RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 MGAT1P26572 445 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 PTPN4P29074 926 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 KCNJ1P48048 391 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 VPS41P49754 854 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 RAB28P51157 221 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 TERF1P54274 439 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 EIF3BP55884 814 aaKnown RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 CRADDP78560 199 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 GPS1Q13098 491 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 LACTB2Q53H82 288 aaPredicted RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 ATP1A1-AS1Q5TC04 95 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 LRRC8BQ6P9F7 803 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 FBXO38Q6PIJ6 1188 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 ZNF534Q76KX8 674 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 OTOAQ7RTW8 1153 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 ADGRF3Q8IZF5 1079 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 C19orf47Q8N9M1 422 aaKnown RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 MAGEC3Q8TD91 643 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 THAP4Q8WY91 577 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 MAGOHBQ96A72 148 aaKnown RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 TRAPPC9Q96Q05 1148 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 DPH2Q9BQC3 489 aaPredicted RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 AP1M1Q9BXS5 423 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 KLHL25Q9H0H3 589 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 INTS7Q9NVH2 962 aaKnown RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.65□□□□□ -0.38
ATRX-208ENST00000622960 SLC39A10Q9ULF5 831 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 AP1M2Q9Y6Q5 423 aa12.65□□□□□ -0.38
ATRX-208ENST00000622960 E5RI56 91 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 MEN1O00255 615 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 KIF5CO60282 957 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 OR2B3O76000 313 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 VAPBO95292 243 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 KRT14P02533 472 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 UGT2B7P16662 529 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 F8A1P23610 371 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 ACADLP28330 430 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 CCR7P32248 378 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 TRIP13Q15645 432 aaPredicted RBP12.64□□□□□ -0.39
ATRX-208ENST00000622960 SLC5A12Q1EHB4 618 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 IZUMO3Q5VZ72 239 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 FAM199XQ6PEV8 388 aaPredicted RBP12.64□□□□□ -0.39
ATRX-208ENST00000622960 NAPRTQ6XQN6 538 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 UNC5AQ6ZN44 842 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 PPM1MQ96MI6 270 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 CCDC68Q9H2F9 335 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 XAB2Q9HCS7 855 aaKnown RBP12.64□□□□□ -0.39
ATRX-208ENST00000622960 TREX1Q9NSU2 369 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 TXLNGQ9NUQ3 528 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 SYBUQ9NX95 663 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 GPN3Q9UHW5 284 aaPredicted RBP12.64□□□□□ -0.39
ATRX-208ENST00000622960 ANAPC2Q9UJX6 822 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 SRPK3Q9UPE1 567 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 FARSAQ9Y285 508 aaKnown RBP12.64□□□□□ -0.39
ATRX-208ENST00000622960 KCNMB2Q9Y691 235 aa12.64□□□□□ -0.39
ATRX-208ENST00000622960 FASNP49327 2511 aaKnown RBP12.64□□□□□ -0.39
ATRX-208ENST00000622960 PIKFYVEQ9Y2I7 2098 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 COL6A6A6NMZ7 2263 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.63□□□□□ -0.39
ATRX-208ENST00000622960 BHMG1C9JSJ3 638 aaPredicted RBP12.63□□□□□ -0.39
ATRX-208ENST00000622960 KALRNO60229 2985 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 CD63P08962 238 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 RAB40ALP0C0E4 278 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 PVRP15151 417 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 NMBRP28336 390 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 PKLRP30613 574 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 CCNFP41002 786 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 NFKB2Q00653 900 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 ABRQ12979 859 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 GPS2Q13227 327 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 SEMA3AQ14563 771 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 UGT8Q16880 541 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 KIAA0930Q6ICG6 404 aaPredicted RBP12.63□□□□□ -0.39
ATRX-208ENST00000622960 CCDC137Q6PK04 289 aaKnown RBP12.63□□□□□ -0.39
ATRX-208ENST00000622960 CDHR3Q6ZTQ4 885 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 MICALCLQ6ZW33 695 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 LDB1Q86U70 411 aaPredicted RBP12.63□□□□□ -0.39
ATRX-208ENST00000622960 SYTL1Q8IYJ3 562 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 DSELQ8IZU8 1212 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 KRT222Q8N1A0 295 aa12.63□□□□□ -0.39
ATRX-208ENST00000622960 PRELID2Q8N945 189 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms