RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 OGFRQ9NZT2 677 aa13.26□□□□□ -0.29
NEK3-210ENST00000620675 PDE10AQ9Y233 779 aa13.26□□□□□ -0.29
NEK3-210ENST00000620675 A0A1W2PQM1 296 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 BTN3A1O00481 513 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 PYGBP11216 843 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 SLC2A4P14672 509 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 CRABP2P29373 138 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 RGS4P49798 205 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 KRT33BQ14525 404 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 ZXDCQ2QGD7 858 aaPredicted RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 KRT71Q3SY84 523 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 AMZ1Q400G9 498 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 NEK10Q6ZWH5 1172 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 UBE2R2Q712K3 238 aaPredicted RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 SPRED1Q7Z699 444 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 MYO1HQ8N1T3 1032 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 OR4E2Q8NGC2 313 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 DENND1AQ8TEH3 1009 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 TRIT1Q9H3H1 467 aaKnown RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 C12orf65Q9H3J6 166 aaKnown RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 RDH14Q9HBH5 336 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 UTP6Q9NYH9 597 aaKnown RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 ATXN7L1Q9ULK2 861 aaPredicted RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 ICKQ9UPZ9 632 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 CACNA1AO00555 2505 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 IQANK1A0A1B0GTG1 560 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 AGPSO00116 658 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 TNFSF14O43557 240 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 SASH3O75995 380 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 ACP1P24666 158 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 CNTFP26441 200 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 MAPK9P45984 424 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 CCL7P80098 99 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 BIRC2Q13490 618 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 PPP1R3AQ16821 1122 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 UNC5DQ6UXZ4 953 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 TIFABQ6ZNK6 161 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 TAOK1Q7L7X3 1001 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 TBC1D21Q8IYX1 336 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 NKAPQ8N5F7 415 aaKnown RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 PDLIM5Q96HC4 596 aaKnown RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 SLC38A3Q99624 504 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 TMEM109Q9BVC6 243 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 DERL2Q9GZP9 239 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 SYTL2Q9HCH5 934 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 ZNF446Q9NWS9 450 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 TMEM9Q9P0T7 183 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.25□□□□□ -0.29
NEK3-210ENST00000620675 LGALS13Q9UHV8 139 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 NCOR2Q9Y618 2525 aa13.25□□□□□ -0.29
NEK3-210ENST00000620675 IGHV1OR21-1A0A087WYE8 117 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 EIF3FO00303 357 aaPredicted RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 KRT15P19012 456 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 KCNA4P22459 653 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 CSF2RBP32927 897 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 RPIAP49247 311 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 NOVA1P51513 510 aaKnown RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 FASTKQ14296 549 aaKnown RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 PLCL1Q15111 1095 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 FBXO48Q5FWF7 155 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 CDHR3Q6ZTQ4 885 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 USP53Q70EK8 1073 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 CLEC14AQ86T13 490 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 ISCA2Q86U28 154 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 TAX1BP1Q86VP1 789 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 DCUN1D3Q8IWE4 304 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 C4orf33Q8N1A6 199 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 LINC01555Q8NAE3 123 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 PPFIBP2Q8ND30 876 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 PPM1MQ96MI6 270 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 PKP4Q99569 1192 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 ALG9Q9H6U8 611 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 MVB12BQ9H7P6 319 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 ADAMTS20P59510 1910 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 BTN3A3O00478 584 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 SYF2O95926 243 aaKnown RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 TFEBP19484 476 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 CSRP1P21291 193 aaKnown RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 MPSTP25325 297 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 CD1CP29017 333 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 YBX1P67809 324 aaKnown RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 SIM1P81133 766 aaPredicted RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 NR1D2Q14995 579 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 RASA2Q15283 850 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 C18orf21Q32NC0 220 aaPredicted RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 C16orf46Q6P387 395 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
NEK3-210ENST00000620675 LCN9Q8WX39 176 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 MTBPQ96DY7 904 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 FOPNLQ96NB1 174 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 CDC6Q99741 560 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 NUDT22Q9BRQ3 303 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 SYNDIG1Q9H7V2 258 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 SPHK1Q9NYA1 384 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 KCNK4Q9NYG8 393 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms