RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SYBUQ9NX95 663 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 BFARQ9NZS9 450 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 POLG2Q9UHN1 485 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 GPC4O75487 556 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 CHRM5P08912 532 aaPredicted RBP16.6■□□□□ 0.25
HMGN3-203ENST00000620514 PTPN4P29074 926 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 PEBP1P30086 187 aaKnown RBP16.6■□□□□ 0.25
HMGN3-203ENST00000620514 PPARGP37231 505 aaPredicted RBP16.6■□□□□ 0.25
HMGN3-203ENST00000620514 VPS41P49754 854 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 ZIC1Q15915 447 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 AARS2Q5JTZ9 985 aaKnown RBP16.6■□□□□ 0.25
HMGN3-203ENST00000620514 TTC27Q6P3X3 843 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 ATG14Q6ZNE5 492 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 SLC22A15Q8IZD6 547 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 LMNTD1Q8N9Z9 388 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 FLVCR1-AS1Q8TAF5 88 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 C9orf43Q8TAL5 461 aaPredicted RBP16.6■□□□□ 0.25
HMGN3-203ENST00000620514 MFSD3Q96ES6 412 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 CARD6Q9BX69 1037 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 IL22Q9GZX6 179 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 FAM60AQ9NP50 221 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 CIDEBQ9UHD4 219 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 ANAPC5Q9UJX4 755 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 POLHQ9Y253 713 aa16.6■□□□□ 0.25
HMGN3-203ENST00000620514 F8W8V4 182 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 MEN1O00255 615 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 PRMT5O14744 637 aaPredicted RBP16.59■□□□□ 0.25
HMGN3-203ENST00000620514 HCRTR1O43613 425 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 TPSB2P20231 275 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 NR1D1P20393 614 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 ARNTP27540 789 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 RORAP35398 523 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 TPSAB1Q15661 275 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 DEFB110Q30KQ9 67 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 LRRC8BQ6P9F7 803 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 ZNF517Q6ZMY9 492 aaPredicted RBP16.59■□□□□ 0.25
HMGN3-203ENST00000620514 FAM20CQ8IXL6 584 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 DSELQ8IZU8 1212 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 C19orf47Q8N9M1 422 aaKnown RBP16.59■□□□□ 0.25
HMGN3-203ENST00000620514 CFAP61Q8NHU2 1237 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 CPT1BQ92523 772 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 CLIP3Q96DZ5 547 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 LRFN5Q96NI6 719 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 GPR87Q9BY21 358 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 P2RY12Q9H244 342 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 ACTR5Q9H9F9 607 aaPredicted RBP16.59■□□□□ 0.25
HMGN3-203ENST00000620514 SYTL2Q9HCH5 934 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 HOMER3Q9NSC5 361 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 PCMTD2Q9NV79 361 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 FARSAQ9Y285 508 aaKnown RBP16.59■□□□□ 0.25
HMGN3-203ENST00000620514 TENM4Q6N022 2769 aa16.59■□□□□ 0.25
HMGN3-203ENST00000620514 GOLGA8KD6RF30 607 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 GOLGA8TH3BQL2 631 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 K7EM74 188 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 AVILO75366 819 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 VAPBO95292 243 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 RECKO95980 971 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 KLK3P07288 261 aaPredicted RBP16.58■□□□□ 0.24
HMGN3-203ENST00000620514 CTSBP07858 339 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 MSL3P1P0C860 447 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 CYP2A7P20853 494 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 AOAHP28039 575 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 PKLRP30613 574 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 TTPAP49638 278 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 ITGA1P56199 1179 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 RPS15P62841 145 aaKnown RBP16.58■□□□□ 0.24
HMGN3-203ENST00000620514 IL10RAQ13651 578 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 PTCHD3Q3KNS1 767 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 DNAJC21Q5F1R6 531 aaKnown RBP16.58■□□□□ 0.24
HMGN3-203ENST00000620514 FAM69BQ5VUD6 431 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 ANKRD22Q5VYY1 191 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 PTRHD1Q6GMV3 140 aaKnown RBP16.58■□□□□ 0.24
HMGN3-203ENST00000620514 HOOK3Q86VS8 718 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 C2orf73Q8N5S3 287 aaPredicted RBP16.58■□□□□ 0.24
HMGN3-203ENST00000620514 ASZ1Q8WWH4 475 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 IL17FQ96PD4 163 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 KIFC1Q9BW19 673 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 TSSK1BQ9BXA7 367 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 OR6C2Q9NZP2 312 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 SERTAD3Q9UJW9 196 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 MAN2B2Q9Y2E5 1009 aa16.58■□□□□ 0.24
HMGN3-203ENST00000620514 A0A0J9YY10 115 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 ISM1B1AKI9 464 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 AP3B1O00203 1094 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 MAP3K7O43318 606 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 NRDCO43847 1150 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 WISP1O95388 367 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 KRT14P02533 472 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 APOA4P06727 396 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 GABRA4P48169 554 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 EIF3BP55884 814 aaKnown RBP16.57■□□□□ 0.24
HMGN3-203ENST00000620514 CDK16Q00536 496 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 GPS1Q13098 491 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 GRB7Q14451 532 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 KCNJ11Q14654 390 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 KYNUQ16719 465 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 UGT8Q16880 541 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 COLEC12Q5KU26 742 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 IZUMO3Q5VZ72 239 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms