RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SNX27Q96L92 541 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SEMA6BQ9H3T3 888 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 FAM86C1Q9NVL1 165 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CKLFQ9UBR5 152 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 FAM96BQ9Y3D0 163 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 AP2A1O95782 977 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 RPSAP08865 295 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 CCL11P51671 97 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 HOXA4Q00056 320 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 MAPK7Q13164 816 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 INPP5AQ14642 412 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NCF4Q15080 339 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MAPKAPK3Q16644 382 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 RNASEH2BQ5TBB1 312 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 OLFML2AQ68BL7 652 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CPT1CQ8TCG5 803 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ELMO3Q96BJ8 720 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 DHRS1Q96LJ7 313 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SEMA4GQ9NTN9 838 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.29□□□□□ -1.88
LPP-220ENST00000617246 GMIPQ9P107 970 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 FAM153AQ9UHL3 310 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NFE2L3Q9Y4A8 694 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PCDHGB7Q9Y5F8 929 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ENTPD2Q9Y5L3 495 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ANKRD61A6NGH8 418 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PFDN1O60925 122 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 OTCP00480 354 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 IFNGP01579 166 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SLC10A6Q3KNW5 377 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CRTC3Q6UUV7 619 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MFSD7Q6UXD7 560 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MED18Q9BUE0 208 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MRPL46Q9H2W6 279 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 PROCRQ9UNN8 238 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TDRD6O60522 2096 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 KIAA1549LQ6ZVL6 1849 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 A0A087X1B8 175 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 E9PQ18 207 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ZNF202O95125 648 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 LGI1O95970 557 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PFKFB1P16118 471 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PTX3P26022 381 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 SLC6A6P31641 620 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ZBTB17Q13105 803 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CYP51A1Q16850 503 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SAMD4BQ5PRF9 694 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 B3GNTL1Q67FW5 361 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 FAM92BQ6ZTR7 304 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NLRC3Q7RTR2 1065 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TFAP2DQ7Z6R9 452 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 GPR149Q86SP6 731 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TC2NQ8N9U0 490 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 BRD7Q9NPI1 651 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 A8MUI8 341 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SIGLEC6O43699 453 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CDK14O94921 469 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ENO1P06733 434 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 C8BP07358 591 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 IL9P15248 144 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 GOT1P17174 413 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 RAD23BP54727 409 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MCL1Q07820 350 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PTGR1Q14914 329 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SPIN3Q5JUX0 258 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 C6orf141Q5SZD1 244 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ERN2Q76MJ5 926 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 NUDT8Q8WV74 236 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 LINGO1Q96FE5 620 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 HIC2Q96JB3 615 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SUSD3Q96L08 255 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NCKAP5O14513 1909 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 IQCMA0A1B0GVH7 501 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 GSC2O15499 205 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SDC3O75056 442 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CAPSQ13938 189 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 GALNT3Q14435 633 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TRMT5Q32P41 509 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 ZNF792Q3KQV3 632 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 BTNL3Q6UXE8 466 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 USP30Q70CQ3 517 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TMPRSS12Q86WS5 348 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TMEFF1Q8IYR6 380 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 THRSPQ92748 146 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 COPS5Q92905 334 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 IGSF8Q969P0 613 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ANKRD27Q96NW4 1050 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 AGAP3Q96P47 875 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 REEP2Q9BRK0 252 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 C17orf80Q9BSJ5 609 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 KATNB1Q9BVA0 655 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TRIM36Q9NQ86 728 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ACSL5Q9ULC5 683 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 A0A0A0MRY4 1105 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TCP11X1B4DZS4 312 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 GLRA3O75311 464 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 EPHB4P54760 987 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 BNIP1Q12981 228 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 FAM69BQ5VUD6 431 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms