RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 PRAMEF13Q5VWM6 474 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 TLDC1Q6P9B6 456 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 RFX6Q8HWS3 928 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 MCEMP1Q8IX19 187 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 IPMKQ8NFU5 416 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 OR4K2Q8NGD2 314 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 HEXDCQ8WVB3 486 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 FERD3LQ96RJ6 166 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 SPSB2Q99619 263 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 MAK16Q9BXY0 300 aaKnown RBP17.63■□□□□ 0.41
IRF3-231ENST00000602190 SLC7A5P2Q9GIP4 190 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 SLC26A1Q9H2B4 701 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 IFT80Q9P2H3 777 aaPredicted RBP17.63■□□□□ 0.41
IRF3-231ENST00000602190 FAM8A1Q9UBU6 413 aa17.63■□□□□ 0.41
IRF3-231ENST00000602190 KLF2Q9Y5W3 355 aaPredicted RBP17.63■□□□□ 0.41
IRF3-231ENST00000602190 A0A1B0GUH1 482 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 KRT1P04264 644 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 ATP1B2P14415 290 aaPredicted RBP17.62■□□□□ 0.41
IRF3-231ENST00000602190 UGT2B7P16662 529 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 ZNF140P52738 457 aaPredicted RBP17.62■□□□□ 0.41
IRF3-231ENST00000602190 OTUD4Q01804 1114 aaKnown RBP17.62■□□□□ 0.41
IRF3-231ENST00000602190 KRT33BQ14525 404 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 ZNF169Q14929 603 aaPredicted RBP17.62■□□□□ 0.41
IRF3-231ENST00000602190 C1orf189Q5VU69 101 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 FCRL6Q6DN72 434 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 KLHDC8BQ8IXV7 354 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 ULK4Q96C45 1275 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 RBM41Q96IZ5 413 aaKnown RBP17.62■□□□□ 0.41
IRF3-231ENST00000602190 WDR54Q9H977 334 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 NDOR1Q9UHB4 597 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 FBXL4Q9UKA2 621 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 HS3ST3B1Q9Y662 390 aa17.62■□□□□ 0.41
IRF3-231ENST00000602190 NCOA6Q14686 2063 aaPredicted RBP17.62■□□□□ 0.41
IRF3-231ENST00000602190 AGTP01019 485 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 ALBP02768 609 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 GSTM1P09488 218 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 ACADLP28330 430 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 DYNLT1P63172 113 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 GSTM4Q03013 218 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 TCEAL1Q15170 157 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 CYP2A13Q16696 494 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 DEFB110Q30KQ9 67 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 TRIM73Q86UV7 250 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 PHC3Q8NDX5 983 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 SLC35G2Q8TBE7 412 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 TFGQ92734 400 aaPredicted RBP17.61■□□□□ 0.41
IRF3-231ENST00000602190 RNF25Q96BH1 459 aaPredicted RBP17.61■□□□□ 0.41
IRF3-231ENST00000602190 QKIQ96PU8 341 aaKnown RBP eCLIP17.61■□□□□ 0.41
IRF3-231ENST00000602190 COPS8Q99627 209 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 XKR8Q9H6D3 395 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 DDX56Q9NY93 547 aaKnown RBP17.61■□□□□ 0.41
IRF3-231ENST00000602190 SPHK1Q9NYA1 384 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 KLHL8Q9P2G9 620 aaPredicted RBP17.61■□□□□ 0.41
IRF3-231ENST00000602190 GPN3Q9UHW5 284 aaPredicted RBP17.61■□□□□ 0.41
IRF3-231ENST00000602190 LUC7L2Q9Y383 392 aaKnown RBP17.61■□□□□ 0.41
IRF3-231ENST00000602190 NF1P21359 2839 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 CPAMD8Q8IZJ3 1885 aa17.61■□□□□ 0.41
IRF3-231ENST00000602190 MED13LQ71F56 2210 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 ZFHX3Q15911 3703 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 C2orf81A6NN90 581 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 H7C0S8 307 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 IFRD1O00458 451 aaPredicted RBP17.6■□□□□ 0.41
IRF3-231ENST00000602190 SERPINC1P01008 464 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 RALBP11234 206 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 PEBP1P30086 187 aaKnown RBP17.6■□□□□ 0.41
IRF3-231ENST00000602190 SHMT2P34897 504 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 PTGER4P35408 488 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 TFDP2Q14188 446 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 TLR1Q15399 786 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 SLC5A12Q1EHB4 618 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 AGAP7PQ5VUJ5 663 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 KIRREL2Q6UWL6 708 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 UNC5AQ6ZN44 842 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 COX15Q7KZN9 410 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 OVCH1Q7RTY7 1134 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 PID1Q7Z2X4 250 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 SNX20Q7Z614 316 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 ZNF655Q8N720 491 aaPredicted RBP17.6■□□□□ 0.41
IRF3-231ENST00000602190 OR13C4Q8NGS5 318 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 ITLN2Q8WWU7 325 aaPredicted RBP17.6■□□□□ 0.41
IRF3-231ENST00000602190 AGAP4Q96P64 663 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 HGH1Q9BTY7 390 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 FICDQ9BVA6 458 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 GBA3Q9H227 469 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 OR6C2Q9NZP2 312 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 TRHDEQ9UKU6 1024 aa17.6■□□□□ 0.41
IRF3-231ENST00000602190 A0A0J9YY10 115 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 HACD1B0YJ81 288 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 PRSS44E7EML9 344 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 PCDH17O14917 1159 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 CST8O60676 142 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 CHRM5P08912 532 aaPredicted RBP17.59■□□□□ 0.41
IRF3-231ENST00000602190 SLC1A1P43005 524 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 FANCCQ00597 558 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 Q0VFX4 171 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 GPR33Q49SQ1 333 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 DENND5AQ6IQ26 1287 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 DNAJB14Q8TBM8 379 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 DCUN1D1Q96GG9 259 aa17.59■□□□□ 0.41
IRF3-231ENST00000602190 ZNF285Q96NJ3 590 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms