RNA–Protein interactions for RNA: ENST00000595961.5

TIMM50-206, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 2,576 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-206	ENST00000595961	COQ6	Q9Y2Z9	468 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	HTR3E	A5X5Y0	456 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	KRT87P	A6NCN2	255 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	ATE1	O95260	518 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	G6PD	P11413	515 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	RECQL	P46063	649 aa	Predicted RBP	12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	TTLL9	Q3SXZ7	439 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	RFTN2	Q52LD8	501 aa	Predicted RBP	12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	DCDC5	Q6ZRR9	648 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	ARMC5	Q96C12	935 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	ZNF641	Q96N77	438 aa	Predicted RBP	12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	RAD9A	Q99638	391 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	NEURL2	Q9BR09	285 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	PAIP1	Q9H074	479 aa	Known RBP	12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	CNOT11	Q9UKZ1	510 aa	Known RBP	12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	ERVW-1	Q9UQF0	538 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	MYRF	Q9Y2G1	1151 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	POLR3H	Q9Y535	204 aa	Predicted RBP	12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	CROCC	Q5TZA2	2017 aa		12.82	□□□□□ -0.36
TIMM50-206	ENST00000595961	TCRBV3S1	A0A5B6	114 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	LSM1	O15116	133 aa	Known RBP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	LEFTY1	O75610	366 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	POLR2E	P19388	210 aa	Known RBP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	AKT1	P31749	480 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	CRY1	Q16526	586 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	AP5B1	Q2VPB7	878 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	SGO1	Q5FBB7	561 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	ARSI	Q5FYB1	569 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	TMEM240	Q5SV17	173 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	SULT1C3	Q6IMI6	304 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	NANOGP8	Q6NSW7	305 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	TMEM53	Q6P2H8	277 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	RMND5B	Q96G75	393 aa	Predicted RBP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	TMEM74	Q96NL1	305 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	KCTD5	Q9NXV2	234 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	FAM8A1	Q9UBU6	413 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	SUN2	Q9UH99	717 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	SNX13	Q9Y5W8	968 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961		K7EPI3	171 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	CD247	P20963	164 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	DDX6	P26196	483 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	PTPN5	P54829	565 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	FPGS	Q05932	587 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	CD300C	Q08708	224 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	BOP1	Q14137	746 aa	Known RBP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	XKR5	Q6UX68	686 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	SERPINA13P	Q6UXR4	307 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	HSD11B1L	Q7Z5J1	315 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	SPPL2C	Q8IUH8	684 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	VRK3	Q8IV63	474 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	CANT1	Q8WVQ1	401 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	MTFMT	Q96DP5	389 aa	Known RBP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	INTS7	Q9NVH2	962 aa	Known RBP	12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	KL	Q9UEF7	1012 aa		12.81	□□□□□ -0.36
TIMM50-206	ENST00000595961	LOC730098	B7Z3J9	87 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	RSL1D1	O76021	490 aa	Known RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	ARHGEF15	O94989	841 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	HSPA8	P11142	646 aa	Known RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	CEBPB	P17676	345 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	RPIA	P49247	311 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	RPL38	P63173	70 aa	Known RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	PLIN5	Q00G26	463 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	HMGCS1	Q01581	520 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	PPIG	Q13427	754 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	1e-7	■■□□□ 11.7
TIMM50-206	ENST00000595961	CAMK1	Q14012	370 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	ZNF648	Q5T619	568 aa	Predicted RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	PRMT9	Q6P2P2	845 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	SLC2A7	Q6PXP3	512 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961		Q6ZVL8	140 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	RBM23	Q86U06	439 aa	Known RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	ACTL8	Q9H568	366 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	PIF1	Q9H611	641 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	ARL15	Q9NXU5	204 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	PCDHA9	Q9Y5H5	950 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	E2F6	O75461	281 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	EED	O75530	441 aa	Known RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	TIPRL	O75663	272 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	CTSL	P07711	333 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	OR56A5	P0C7T3	313 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	SLC2A4	P14672	509 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	MYOG	P15173	224 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	ETV3	P41162	512 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	BCAP31	P51572	246 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	POLR2L	P62875	67 aa	Known RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	GRIK2	Q13002	908 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	MTX3	Q5HYI7	312 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	PRSS36	Q5K4E3	855 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	KRT80	Q6KB66	452 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	CYP20A1	Q6UW02	462 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	UBE2R2	Q712K3	238 aa	Predicted RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	ZBTB46	Q86UZ6	589 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	KIAA2013	Q8IYS2	634 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	BEND7	Q8N7W2	519 aa	Predicted RBP	12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	OR2T34	Q8NGX1	318 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	OR2T3	Q8NH03	318 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	FRS2	Q8WU20	508 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	TMEM125	Q96AQ2	219 aa		12.8	□□□□□ -0.36
TIMM50-206	ENST00000595961	MRGPRX3	Q96LB0	322 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms