RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
LIG1-208ENST00000595758 LRRC8EQ6NSJ5 796 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 CYHR1Q6ZMK1 362 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 TRMT10CQ7L0Y3 403 aaKnown RBP13.94□□□□□ -0.18
LIG1-208ENST00000595758 RAB11FIP2Q7L804 512 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 RCBTB1Q8NDN9 531 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 WDR36Q8NI36 951 aaKnown RBP13.94□□□□□ -0.18
LIG1-208ENST00000595758 MAGEC3Q8TD91 643 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 EEF1AKMT1Q8WVE0 214 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 RAD51AP1Q96B01 352 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 RBBP8Q99708 897 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 NRTNQ99748 197 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 CMKLR1Q99788 373 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 NRSN2Q9GZP1 204 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 ACSS3Q9H6R3 686 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 ANKZF1Q9H8Y5 726 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 AKAP7Q9P0M2 348 aaPredicted RBP13.94□□□□□ -0.18
LIG1-208ENST00000595758 PLAGL1Q9UM63 463 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 ICKQ9UPZ9 632 aa13.94□□□□□ -0.18
LIG1-208ENST00000595758 MTO1Q9Y2Z2 717 aaKnown RBP13.94□□□□□ -0.18
LIG1-208ENST00000595758 COL27A1Q8IZC6 1860 aaPredicted RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 AGRPO00253 132 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 BTN3A3O00478 584 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 HGSO14964 777 aaPredicted RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 PSIP1O75475 530 aaKnown RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 FAM155BO75949 473 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 CATP04040 527 aaKnown RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 TNFRSF8P28908 595 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 CSTF2P33240 577 aaKnown RBP eCLIP13.93□□□□□ -0.18
LIG1-208ENST00000595758 SPRP35270 261 aaPredicted RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 BDKRB1P46663 353 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 LSSP48449 732 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 RAB28P51157 221 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 PGGT1BP53609 377 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 PMS2P54278 862 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 SLC12A2P55011 1212 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 IL2P60568 153 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 PPP1CAP62136 330 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 POU4F1Q01851 419 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 EIF3IQ13347 325 aaKnown RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 C16orf72Q14CZ0 275 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 C3orf38Q5JPI3 329 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 FAM92BQ6ZTR7 304 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 PIWIL4Q7Z3Z4 852 aaKnown RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 ARHGAP22Q7Z5H3 698 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 FBXO39Q8N4B4 442 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 ASB11Q8WXH4 323 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 UBXN4Q92575 508 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 NXPE2Q96DL1 559 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 MRRFQ96E11 262 aaKnown RBP13.93□□□□□ -0.18
LIG1-208ENST00000595758 LINGO1Q96FE5 620 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 POLR1BQ9H9Y6 1135 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 OR6C2Q9NZP2 312 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 CIDEBQ9UHD4 219 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 SLC39A10Q9ULF5 831 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 SATB2Q9UPW6 733 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 LOXL2Q9Y4K0 774 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 AK5Q9Y6K8 562 aa13.93□□□□□ -0.18
LIG1-208ENST00000595758 SPEGQ15772 3267 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 A0A087WUV0 522 aaPredicted RBP13.92□□□□□ -0.18
LIG1-208ENST00000595758 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
LIG1-208ENST00000595758 GSAPA4D1B5 854 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 ARHGEF33A8MVX0 844 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 MATN2O00339 956 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 BTN3A1O00481 513 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 TOX3O15405 576 aaPredicted RBP13.92□□□□□ -0.18
LIG1-208ENST00000595758 KIF1CO43896 1103 aaKnown RBP13.92□□□□□ -0.18
LIG1-208ENST00000595758 RASSF9O75901 435 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 MPOP05164 745 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 PKLRP30613 574 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 GABREP78334 506 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 GRB7Q14451 532 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 USP10Q14694 798 aaKnown RBP13.92□□□□□ -0.18
LIG1-208ENST00000595758 RTP5Q14D33 572 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 CCSMST1Q4G0I0 132 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 CACHD1Q5VU97 1274 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 FOXR1Q6PIV2 292 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 ADGRF3Q8IZF5 1079 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 MYO1HQ8N1T3 1032 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 RAB42Q8N4Z0 105 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 AGBL5Q8NDL9 886 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 UHMK1Q8TAS1 419 aaKnown RBP13.92□□□□□ -0.18
LIG1-208ENST00000595758 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.92□□□□□ -0.18
LIG1-208ENST00000595758 GATA6Q92908 595 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 TSPAN17Q96FV3 270 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 CD180Q99467 661 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 GPR22Q99680 433 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 AKAP13Q12802 2813 aa13.92□□□□□ -0.18
LIG1-208ENST00000595758 CHD8Q9HCK8 2581 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 PIPSLA2A3N6 862 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 PMS2P1A4D2B8 440 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 C2orf74A8MZ97 194 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 GFYI3L273 518 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 RASGRF2O14827 1237 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 PLD2O14939 933 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 ZBTB14O43829 449 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 TSPAN12O95859 305 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 CHRM5P08912 532 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms