RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CLEC6AQ6EIG7 209 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 Q6ZSR6 202 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 SYVN1Q86TM6 617 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 CLYBLQ8N0X4 340 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 OR13H1Q8NG92 308 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 OR52B6Q8NGF0 335 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 NECAB3Q96P71 396 aaPredicted RBP20.26■□□□□ 0.83
PNKP-203ENST00000593946 OR2M4Q96R27 311 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 NUF2Q9BZD4 464 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 SLC32A1Q9H598 525 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 NOL11Q9H8H0 719 aaKnown RBP20.26■□□□□ 0.83
PNKP-203ENST00000593946 STK38LQ9Y2H1 464 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 GPSM3Q9Y4H4 160 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 MYO1CO00159 1063 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 OR7A17O14581 309 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 AZIN1O14977 448 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 PIK3CGP48736 1102 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 PDCD2Q16342 344 aaPredicted RBP20.25■□□□□ 0.83
PNKP-203ENST00000593946 KANK2Q63ZY3 851 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 LRRC70Q7Z2Q7 622 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 MTDHQ86UE4 582 aaKnown RBP20.25■□□□□ 0.83
PNKP-203ENST00000593946 ALYREFQ86V81 257 aaKnown RBP20.25■□□□□ 0.83
PNKP-203ENST00000593946 CADM4Q8NFZ8 388 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 ATL1Q8WXF7 558 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 PKP4Q99569 1192 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 IPPKQ9H8X2 491 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 GPR27Q9NS67 375 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 STOX2Q9P2F5 926 aaPredicted RBP20.25■□□□□ 0.83
PNKP-203ENST00000593946 PNMA8BQ9ULN7 279 aaPredicted RBP20.25■□□□□ 0.83
PNKP-203ENST00000593946 PSMD13Q9UNM6 376 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 APOBEC2Q9Y235 224 aaKnown RBP20.25■□□□□ 0.83
PNKP-203ENST00000593946 KCNK6Q9Y257 313 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 FIS1Q9Y3D6 152 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 PLEKHM1Q9Y4G2 1056 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 PCM1Q15154 2024 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 BDP1A6H8Y1 2624 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 MUC3AQ02505 3323 aa20.25■□□□□ 0.83
PNKP-203ENST00000593946 TRPC5OSA6NMA1 111 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 METTL12A8MUP2 240 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 HGSO14964 777 aaPredicted RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 AXIN1O15169 862 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 SLC16A8O95907 504 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 PDGFBP01127 241 aaPredicted RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 SLC35G4P0C7Q5 338 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 FOXA1P55317 472 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 TRAF3Q13114 568 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 PTCHD3Q3KNS1 767 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 CAPRIN2Q6IMN6 1127 aaKnown RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 GPRIN3Q6ZVF9 776 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 SLC22A18ASQ8N1D0 253 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 SNX19Q92543 992 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 TFGQ92734 400 aaPredicted RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 RILPQ96NA2 401 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 OSGEPL1Q9H4B0 414 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 KLQ9UEF7 1012 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 ASF1AQ9Y294 204 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 ST14Q9Y5Y6 855 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 ARHGEF17Q96PE2 2063 aaPredicted RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 IFRD1O00458 451 aaPredicted RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 GIPC1O14908 333 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 PI15O43692 258 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 OTCP00480 354 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 EPB42P16452 691 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 RPL10P27635 214 aaKnown RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 IMPA1P29218 277 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 CLCNKAP51800 687 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 INHBCP55103 352 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 BTKQ06187 659 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 FAM219BQ5XKK7 198 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 YTHDF3Q7Z739 585 aaKnown RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 KLHDC8AQ8IYD2 350 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 TSACCQ96A04 125 aaPredicted RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 ERP27Q96DN0 273 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 MAELQ96JY0 434 aaKnown RBP20.24■□□□□ 0.83
PNKP-203ENST00000593946 KCNA7Q96RP8 456 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 MYLK2Q9H1R3 596 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 MEAF6Q9HAF1 191 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 INVSQ9Y283 1065 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 ANGPTL3Q9Y5C1 460 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 DNAJC15Q9Y5T4 150 aa20.24■□□□□ 0.83
PNKP-203ENST00000593946 ATXN2Q99700 1313 aaKnown RBP20.23■□□□□ 0.83
PNKP-203ENST00000593946 KNL1Q8NG31 2342 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 SKAP2O75563 359 aaPredicted RBP20.23■□□□□ 0.83
PNKP-203ENST00000593946 ERVPABLB-1P60509 514 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 SRP54P61011 504 aaKnown RBP20.23■□□□□ 0.83
PNKP-203ENST00000593946 ALG11Q2TAA5 492 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 LETMD1Q6P1Q0 360 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 AGTRAPQ6RW13 159 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 DCUN1D3Q8IWE4 304 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 FAM174AQ8TBP5 190 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 MAGEC3Q8TD91 643 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 EDAQ92838 391 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 PYCR2Q96C36 320 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 SPACA7Q96KW9 195 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 OR52B2Q96RD2 323 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 NMUR2Q9GZQ4 415 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 ATG10Q9H0Y0 220 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 WDR55Q9H6Y2 383 aaPredicted RBP20.23■□□□□ 0.83
PNKP-203ENST00000593946 TCF7L2Q9NQB0 619 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 WDR37Q9Y2I8 494 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms