RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PDIA2Q13087 525 aaKnown RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 CTSL3PQ5NE16 218 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 XKR5Q6UX68 686 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 UNC5DQ6UXZ4 953 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 UNC5AQ6ZN44 842 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 CCDC81Q6ZN84 652 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 CENPUQ71F23 418 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 KMT5CQ86Y97 462 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ANKMY2Q8IV38 441 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 VRK3Q8IV63 474 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 DENND6AQ8IWF6 608 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 PALM2Q8IXS6 379 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ZBTB2Q8N680 514 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ZSCAN1Q8NBB4 408 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 OR5K2Q8NHB8 316 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 KLHL6Q8WZ60 621 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 N4BP2L2Q92802 583 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 LRRC39Q96DD0 335 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 PWWP2AQ96N64 755 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 CCNL2Q96S94 520 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ERP44Q9BS26 406 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 RAB17Q9H0T7 212 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 FANCEQ9HB96 536 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ACTR10Q9NZ32 417 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 RARRES3Q9UL19 164 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 PLAGL1Q9UM63 463 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 COMMD10Q9Y6G5 202 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 SMG1Q96Q15 3661 aaKnown RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 IGHV5-51A0A0C4DH38 117 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 SLC9B1P1A6NJY1 282 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 BTN3A3O00478 584 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 BTN3A1O00481 513 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 RAD1O60671 282 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 VPS26AO75436 327 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 HAUS5O94927 633 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 SLCO2B1O94956 709 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 ZBTB11O95625 1053 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-227ENST00000591849 CCNFP41002 786 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 KPNA2P52292 529 aaKnown RBP9.77□□□□□ -0.85
BRCA1-227ENST00000591849 ADARP55265 1226 aaKnown RBP9.77□□□□□ -0.85
BRCA1-227ENST00000591849 SH3BP2P78314 561 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 MPP1Q00013 466 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 CLN3Q13286 438 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 TUBB3Q13509 450 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 IL11RAQ14626 422 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 TGIF1Q15583 401 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 WHAMMP3Q1A5X7 153 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 MSS51Q4VC12 460 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 ZNF789Q5FWF6 425 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 ARHGAP40Q5TG30 622 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 UGT3A1Q6NUS8 523 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 FBXO38Q6PIJ6 1188 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 CNSTQ6PJW8 725 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 PPP1R3BQ86XI6 285 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 DCUN1D3Q8IWE4 304 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 UNC5BQ8IZJ1 945 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 CACNA2D3Q8IZS8 1091 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 CARFQ8N187 725 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 MNS1Q8NEH6 495 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 PYROXD1Q8WU10 500 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 INPP5DQ92835 1189 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 KIAA1143Q96AT1 154 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-227ENST00000591849 RAD51AP1Q96B01 352 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 SLC41A2Q96JW4 573 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 BIRC8Q96P09 236 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 SLC7A5P2Q9GIP4 190 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 KLHL25Q9H0H3 589 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 APMAPQ9HDC9 416 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 C1GALT1Q9NS00 363 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 OR6C2Q9NZP2 312 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-227ENST00000591849 WHRNQ9P202 907 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 CIDEBQ9UHD4 219 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 LNPEPQ9UIQ6 1025 aa9.77□□□□□ -0.85
BRCA1-227ENST00000591849 HELZ2Q9BYK8 2649 aaKnown RBP9.77□□□□□ -0.85
BRCA1-227ENST00000591849 BPTFQ12830 3046 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 PABPN1LA6NDY0 278 aaKnown RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 STK17BO94768 372 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 F7P08709 466 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CHRM5P08912 532 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CCNYL3P0C7X3 344 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 EBLN1P0CF75 366 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 FOLR1P15328 257 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 MAP4P27816 1152 aaKnown RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 RAB28P51157 221 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CAV1Q03135 178 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 VAC14Q08AM6 782 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 TSTA3Q13630 321 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 TUBB2AQ13885 445 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 KCNAB1Q14722 419 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 KIR2DS3Q14952 304 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 KYNUQ16719 465 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 KLHL38Q2WGJ6 581 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 ACSBG2Q5FVE4 666 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 C8orf74Q6P047 294 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CAPN12Q6ZSI9 719 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 GPR155Q7Z3F1 870 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 VASH2Q86V25 355 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 BPHLQ86WA6 291 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CCDC25Q86WR0 208 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms