RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 IFNAR1P17181 557 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 SP100P23497 879 aaPredicted RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 SLC6A6P31641 620 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 HOXA1P49639 335 aaPredicted RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 ASCL1P50553 236 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 CRIP2P52943 208 aaPredicted RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 RPS18P62269 152 aaKnown RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 PHEXP78562 749 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 PRKCZQ05513 592 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 ACSM1Q08AH1 577 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 PRKAA1Q13131 559 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 DMP1Q13316 513 aaPredicted RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 PPIGQ13427 754 aaKnown RBP eCLIP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 KLHL26Q53HC5 615 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 PRR27Q6MZM9 219 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 GDPD4Q6W3E5 623 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 ZBTB49Q6ZSB9 765 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 KCTD8Q6ZWB6 473 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 TMPRSS11FQ6ZWK6 438 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 DGLUCYQ7Z3D6 616 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 PIWIL4Q7Z3Z4 852 aaKnown RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 CPSF7Q8N684 471 aaKnown RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 WDSUB1Q8N9V3 476 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 OR5M8Q8NGP6 311 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 SETD6Q8TBK2 473 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 RNF128Q8TEB7 428 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 SECTM1Q8WVN6 248 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 ROBO4Q8WZ75 1007 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 SGK494Q96LW2 274 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 GBP5Q96PP8 586 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 SPAG5Q96R06 1193 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 FEVQ99581 238 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 TBC1D17Q9HA65 648 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 ACKR4Q9NPB9 350 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 ABCF3Q9NUQ8 709 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.25□□□□□ -1.89
SMAD4-207ENST00000589076 PADI2Q9Y2J8 665 aa3.25□□□□□ -1.89
SMAD4-207ENST00000589076 A0A1W2PPI3 338 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 FEZF1A0PJY2 475 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 HYKKA2RU49 373 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 NEMP2A6NFY4 417 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 C16orf97H3BN30 126 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 CCDC188H7C350 402 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 PTGESO14684 152 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 WDR46O15213 610 aaKnown RBP3.24□□□□□ -1.89
SMAD4-207ENST00000589076 CTSVO60911 334 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 IGHV4-39P01824 125 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 HSP90AB1P08238 724 aaKnown RBP3.24□□□□□ -1.89
SMAD4-207ENST00000589076 OR52Z1P0C646 297 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 CKMT2P17540 419 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 CBLP22681 906 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 DGKAP23743 735 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 CCR10P46092 362 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 GLIPR1P48060 266 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 FMO5P49326 533 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 TPD52P55327 224 aaPredicted RBP3.24□□□□□ -1.89
SMAD4-207ENST00000589076 MFAP5Q13361 173 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 ZNF273Q14593 569 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 KIR2DS3Q14952 304 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 KIF26BQ2KJY2 2108 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 HECTD3Q5T447 861 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 STXBP5Q5T5C0 1151 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 ZNF852Q6ZMS4 543 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 C9orf139Q6ZV77 190 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 GALNTL5Q7Z4T8 443 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 DSG4Q86SJ6 1040 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 METTL23Q86XA0 190 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 THNSL1Q8IYQ7 743 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 CEP57L1Q8IYX8 460 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 MAB21L3Q8N8X9 362 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 CD101Q93033 1021 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 SCRN2Q96FV2 425 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 C17orf77Q96MU5 243 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 ADPGKQ9BRR6 497 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 EGLN1Q9GZT9 426 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 APOBEC3GQ9HC16 384 aaKnown RBP3.24□□□□□ -1.89
SMAD4-207ENST00000589076 ZBTB20Q9HC78 741 aaPredicted RBP3.24□□□□□ -1.89
SMAD4-207ENST00000589076 OSER1Q9NX31 292 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 ABT1Q9ULW3 272 aaKnown RBP3.24□□□□□ -1.89
SMAD4-207ENST00000589076 LIPGQ9Y5X9 500 aa3.24□□□□□ -1.89
SMAD4-207ENST00000589076 SOS1Q07889 1333 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-207ENST00000589076 IGKV3D-20A0A0C4DH25 116 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ANXA2P2A6NMY6 339 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 CLDN4O14493 209 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 WDPCPO95876 746 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 IGHV2-70P01814 119 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 GLULP15104 373 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 PSMA3P25788 255 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 HOXC8P31273 242 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 HSPA4P34932 840 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 GP5P40197 560 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 NR2C2P49116 596 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 DVL1P1P54792 670 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-207ENST00000589076 HNRNPKP61978 463 aaKnown RBP eCLIP3.23□□□□□ -1.894e-8■■■■■ 26.9
SMAD4-207ENST00000589076 POLR2LP62875 67 aaKnown RBP3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ACCSLQ4AC99 568 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 SIRPB2Q5JXA9 342 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 CCNYL2Q5T2Q4 361 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ZNF772Q68DY9 489 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-207ENST00000589076 MFSD12Q6NUT3 480 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms