RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PLK5Q496M5 336 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SYTL3Q4VX76 610 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 EOGTQ5NDL2 527 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 AGBL4Q5VU57 503 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 GTF2H2CQ6P1K8 395 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 PNCKQ6P2M8 343 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 USP30Q70CQ3 517 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 LARP4Q71RC2 724 aaKnown RBP eCLIP10.16□□□□□ -0.78
LIG3-203ENST00000585370 DET1Q7L5Y6 550 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SYT13Q7L8C5 426 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SPATA19Q7Z5L4 167 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 TREML1Q86YW5 311 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 RASGRP3Q8IV61 690 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 C10orf67Q8IYJ2 551 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 FBXO15Q8NCQ5 510 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 ATP6V1E2Q96A05 226 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 C19orf60Q96EN9 201 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 CCDC97Q96F63 343 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 NTMT1Q9BV86 223 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 TBC1D10AQ9BXI6 508 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SMOC1Q9H4F8 434 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SLC32A1Q9H598 525 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 ZNF385DQ9H6B1 395 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 ZDHHC4Q9NPG8 344 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SEMA4BQ9NPR2 832 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 ACSS2Q9NR19 701 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 RIC8BQ9NVN3 520 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 TMEM45AQ9NWC5 275 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 NDE1Q9NXR1 346 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 UTP6Q9NYH9 597 aaKnown RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 TAS2R1Q9NYW7 299 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 WWOXQ9NZC7 414 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 ARMCX1Q9P291 453 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 OPTCQ9UBM4 332 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 NCKAP1Q9Y2A7 1128 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 DNAJC15Q9Y5T4 150 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 GON4LQ3T8J9 2241 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 PLXNA2O75051 1894 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 CHD6Q8TD26 2715 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 GSC2O15499 205 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 KCNJ13O60928 360 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PSIP1O75475 530 aaKnown RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 WDR47O94967 919 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PCDH8O95206 1070 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 SOD1P00441 154 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 CATP04040 527 aaKnown RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 EBLN1P0CF75 366 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 COX4I1P13073 169 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 EPB42P16452 691 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 LBPP18428 481 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 WASP42768 502 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 AGTR2P50052 363 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 CCNG1P51959 295 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 ELF3P78545 371 aaPredicted RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 RPA4Q13156 261 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 SGCGQ13326 291 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 BOP1Q14137 746 aaKnown RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 UBAP2LQ14157 1087 aaKnown RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 SMU1Q2TAY7 513 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 TTC31Q49AM3 519 aaPredicted RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 AASDHQ4L235 1098 aaPredicted RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 RPS27LQ71UM5 84 aaKnown RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 LRRC70Q7Z2Q7 622 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 GOLGA7Q7Z5G4 137 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 MILR1Q7Z6M3 343 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 ADGRG6Q86SQ4 1221 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 SYVN1Q86TM6 617 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 SLC22A15Q8IZD6 547 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PELI3Q8N2H9 469 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 AADATQ8N5Z0 425 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 IL17RCQ8NAC3 791 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 MAGEC3Q8TD91 643 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 TWIST2Q8WVJ9 160 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 SKA2Q8WVK7 121 aaPredicted RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 MCUR1Q96AQ8 359 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 FBXL8Q96CD0 374 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PRR11Q96HE9 360 aaPredicted RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 COX14Q96I36 57 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 CCDC138Q96M89 665 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 NSUN5Q96P11 429 aaKnown RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 DUSP15Q9H1R2 295 aaPredicted RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 DPEP2Q9H4A9 486 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 IPPKQ9H8X2 491 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 ZBTB26Q9HCK0 441 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PREBQ9HCU5 417 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 ARL15Q9NXU5 204 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 EBF1Q9UH73 591 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 EIF2B4Q9UI10 523 aaKnown RBP10.15□□□□□ -0.78
LIG3-203ENST00000585370 ADAMTS6Q9UKP5 1117 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 FZD4Q9ULV1 537 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PDE10AQ9Y233 779 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 COQ6Q9Y2Z9 468 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PCDHGA5Q9Y5G8 931 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 SPEGQ15772 3267 aa10.15□□□□□ -0.78
LIG3-203ENST00000585370 PLXNB3Q9ULL4 1909 aa10.15□□□□□ -0.79
LIG3-203ENST00000585370 MGAT4DA6NG13 374 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 IGLON5A6NGN9 336 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 LRRC14BA6NHZ5 514 aa10.14□□□□□ -0.79
LIG3-203ENST00000585370 OR2AG2A6NM03 316 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms