RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 TMCO4Q5TGY1 634 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 SYPL2Q5VXT5 272 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 CES4AQ5XG92 561 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 BORAQ6PGQ7 559 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 BHLHA9Q7RTU4 235 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 TMPRSS9Q7Z410 1059 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 CNTN4Q8IWV2 1026 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 SCUBE1Q8IWY4 988 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 KIRREL3Q8IZU9 778 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 RBFAQ8N0V3 343 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 DNAJC9Q8WXX5 260 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 JADE3Q92613 823 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 FAM131CQ96AQ9 280 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 MIEF2Q96C03 454 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 CMTM5Q96DZ9 223 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 TMA16Q96EY4 203 aaKnown RBP7.29□□□□□ -1.24
NF1-222ENST00000582892 PRICKLE1Q96MT3 831 aaPredicted RBP7.29□□□□□ -1.24
NF1-222ENST00000582892 HAPLN3Q96S86 360 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 CCDC3Q9BQI4 270 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 GORASP1Q9BQQ3 440 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 CCDC28BQ9BUN5 200 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 MECRQ9BV79 373 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 BHLHE41Q9C0J9 482 aaPredicted RBP7.29□□□□□ -1.24
NF1-222ENST00000582892 PREBQ9HCU5 417 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 SNX15Q9NRS6 342 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 ANAPC2Q9UJX6 822 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 ACSL6Q9UKU0 697 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 PNMA8BQ9ULN7 279 aaPredicted RBP7.29□□□□□ -1.24
NF1-222ENST00000582892 SCML1Q9UN30 329 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 ERVW-1Q9UQF0 538 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 DNAJC16Q9Y2G8 782 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 LRCH1Q9Y2L9 728 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 AAR2Q9Y312 384 aaKnown RBP7.29□□□□□ -1.24
NF1-222ENST00000582892 MFHAS1Q9Y4C4 1052 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 LRP4O75096 1905 aa7.29□□□□□ -1.24
NF1-222ENST00000582892 SVILO95425 2214 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 WIPF3A6NGB9 483 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 YJEFN3A6XGL0 299 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 PRAMEF26H0Y7S4 382 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 LINC01387J3KSC0 135 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 NTN3O00634 580 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 ZNF195O14628 629 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 DUX1O43812 170 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 CCNT2O60583 730 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 TRIM13O60858 407 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 RNGTTO60942 597 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 ENTPD5O75356 428 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 PRF1P14222 555 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 CD68P34810 354 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 CPOXP36551 454 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 SERPINB5P36952 375 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 KPNA2P52292 529 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 RPL26P61254 145 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 ST8SIA6P61647 398 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 PITX1P78337 314 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 XIAPP98170 497 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 NME3Q13232 169 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 MPP3Q13368 585 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 C1orf61Q13536 156 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 SPIDRQ14159 915 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 FZD2Q14332 565 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 KPNB1Q14974 876 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 RCN1Q15293 331 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 TCEA2Q15560 299 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 GSTA3Q16772 222 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 KHDC1Q4VXA5 237 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 ACSBG2Q5FVE4 666 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 PCID2Q5JVF3 399 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 SH2D4BQ5SQS7 431 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 MANEALQ5VSG8 457 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 CAPRIN2Q6IMN6 1127 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 IRGCQ6NXR0 463 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 ZCCHC8Q6NZY4 707 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 PGM2L1Q6PCE3 622 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 LRRC74BQ6ZQY2 392 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 PTAR1Q7Z6K3 402 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 STRA8Q7Z7C7 330 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 GALNT7Q86SF2 657 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 SETD3Q86TU7 594 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 TTC7BQ86TV6 843 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 KCNMB4Q86W47 210 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 TRIM69Q86WT6 500 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 DTX1Q86Y01 620 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 MYLK4Q86YV6 388 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 ULK2Q8IYT8 1036 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 APCDD1Q8J025 514 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 PPFIBP2Q8ND30 876 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 RBM15BQ8NDT2 890 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 OR52K1Q8NGK4 314 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 GABPB2Q8TAK5 448 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 C9orf43Q8TAL5 461 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 ACTRT2Q8TDY3 377 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 SSC4DQ8WTU2 575 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 PDCD6IPQ8WUM4 868 aaKnown RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 ZNF669Q96BR6 464 aaPredicted RBP7.28□□□□□ -1.24
NF1-222ENST00000582892 CNDP1Q96KN2 507 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 ZNF778Q96MU6 729 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 RILPQ96NA2 401 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 FCRL5Q96RD9 977 aa7.28□□□□□ -1.24
NF1-222ENST00000582892 SORT1Q99523 831 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms