RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CBARPQ8N350 705 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 TSPEARQ8WU66 669 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 SCAMP4Q969E2 229 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 RMND5BQ96G75 393 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 ZBTB18Q99592 522 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 DCUN1D5Q9BTE7 237 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 OSBPL11Q9BXB4 747 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 MTG2Q9H4K7 406 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 CCM2LQ9NUG4 571 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 EBF1Q9UH73 591 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 EIF3LQ9Y262 564 aaKnown RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 PLOD2O00469 737 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 SOCS2O14508 198 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 C1SP09871 688 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 FASP25445 335 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 B4GALNT1Q00973 533 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 LCN8Q6JVE9 175 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 CLVS1Q8IUQ0 354 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 CBR4Q8N4T8 237 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF366Q8N895 744 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 ING5Q8WYH8 240 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 HEBP1Q9NRV9 189 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 INIPQ9NRY2 104 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 TDP1Q9NUW8 608 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 HIST1H2AGP0C0S8 130 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-205ENST00000582730 HIST1H2ADP20671 130 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 CTNNB1P35222 781 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 CCR3P51677 355 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 PRKCQQ04759 706 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 CBX2Q14781 532 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-205ENST00000582730 C1orf53Q5VUE5 145 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 GDPD4Q6W3E5 623 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 IRF7Q92985 503 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 HIST1H2AHQ96KK5 128 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 HIST1H2AJQ99878 128 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 H2AFJQ9BTM1 129 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 ACTL8Q9H568 366 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 PNPLA3Q9NST1 481 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 PORP16435 677 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-205ENST00000582730 XPAP23025 273 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-205ENST00000582730 FAM174BQ3ZCQ3 159 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 ARHGAP15Q53QZ3 475 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 LIX1Q8N485 282 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 BEND7Q8N7W2 519 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-205ENST00000582730 ECHDC3Q96DC8 303 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 LYSMD1Q96S90 227 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 DPY30Q9C005 99 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 ARMC1Q9NVT9 282 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-205ENST00000582730 CARNS1A5YM72 827 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 H0YJX3 145 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 WDR47O94967 919 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 RHOP08100 348 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 SPINT3P49223 89 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 PSMD7P51665 324 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 OR4D2P58180 307 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 PHEXP78562 749 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 CTBSQ01459 385 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 SELPLGQ14242 412 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF648Q5T619 568 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-205ENST00000582730 ADGRG5Q8IZF4 528 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 RGL4Q8IZJ4 473 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 LRTM1Q9HBL6 345 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 PDE10AQ9Y233 779 aa13.37□□□□□ -0.27
SRSF1-205ENST00000582730 OR2AG2A6NM03 316 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 TMX2-CTNND1H3BSU7 103 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 TUBA4AP68366 448 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 Q6ZVL8 140 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 HID1Q8IV36 788 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 VRK3Q8IV63 474 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 KRTCAP2Q8N6L1 136 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 ISOC1Q96CN7 298 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 DUS3LQ96G46 650 aaKnown RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 PKD2L2Q9NZM6 624 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 ANAPC2Q9UJX6 822 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 HCFC2Q9Y5Z7 792 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 POLR2EP19388 210 aaKnown RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 ITPKAP23677 461 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 NFKBIAP25963 317 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 GNPDA1P46926 289 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 NEK2P51955 445 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 POLR2LP62875 67 aaKnown RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 ARSIQ5FYB1 569 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 CACHD1Q5VU97 1274 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 GPR141Q7Z602 305 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 SELENOMQ8WWX9 145 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 ELMO1Q92556 727 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 ISG20Q96AZ6 181 aaKnown RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 C12orf43Q96C57 262 aaKnown RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 LMLNQ96KR4 655 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 RNF145Q96MT1 663 aa13.36□□□□□ -0.27
SRSF1-205ENST00000582730 UHRF1Q96T88 793 aaPredicted RBP13.36□□□□□ -0.27
SRSF1-205ENST00000582730 THUMPD3Q9BV44 507 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms