RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 OR1L3Q8NH93 324 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 COG1Q8WTW3 980 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 LRFN5Q96NI6 719 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 BIRC8Q96P09 236 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 OR2A14Q96R47 310 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 TRIM56Q9BRZ2 755 aaKnown RBP10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 CHRNA10Q9GZZ6 450 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 GRPEL1Q9HAV7 217 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 FAM60AQ9NP50 221 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 KCND1Q9NSA2 647 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 ACTR10Q9NZ32 417 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 TUBD1Q9UJT1 453 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 PADI1Q9ULC6 663 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 SOX13Q9UN79 622 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 ASF1AQ9Y294 204 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 PCDHB3Q9Y5E6 796 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 SHANK1Q9Y566 2161 aa10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 SPTAN1Q13813 2472 aaKnown RBP10.25□□□□□ -0.77
SUPT4H1-204ENST00000580947 DOPEY2Q9Y3R5 2298 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 C2orf74A8MZ97 194 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 C21orf140B9A014 251 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 AP3B1O00203 1094 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 PRMT5O14744 637 aaPredicted RBP10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 CPNE3O75131 537 aaKnown RBP10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 AVILO75366 819 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 SCRG1O75711 98 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 RECKO95980 971 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 MT-ND3P03897 115 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 CAPN1P07384 714 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 CHRM5P08912 532 aaPredicted RBP10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 TCN2P20062 427 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 CDH3P22223 829 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 RPS3P23396 243 aaKnown RBP eCLIP10.24□□□□□ -0.773e-9■■■■■ 37.6
SUPT4H1-204ENST00000580947 PKLRP30613 574 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 SHMT2P34897 504 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 MAGEA3P43357 314 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 TTPAP49638 278 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 MC1RQ01726 317 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 NFATC3Q12968 1075 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 PRKAA1Q13131 559 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 KCNAB2Q13303 367 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 GBX1Q14549 363 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 TYSND1Q2T9J0 566 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 DNAJC21Q5F1R6 531 aaKnown RBP10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 AARS2Q5JTZ9 985 aaKnown RBP10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 CTSL3PQ5NE16 218 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 PLEKHS1Q5SXH7 462 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 TMTC4Q5T4D3 741 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 ARMC3Q5W041 872 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 ZNF385CQ66K41 422 aaPredicted RBP10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 LCN10Q6JVE6 187 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 ZNF449Q6P9G9 518 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 FAM199XQ6PEV8 388 aaPredicted RBP10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 GSTA5Q7RTV2 222 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 TMEM135Q86UB9 458 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 TRIM73Q86UV7 250 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 KRT222Q8N1A0 295 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 LINC01555Q8NAE3 123 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 CPT1BQ92523 772 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 LPGAT1Q92604 370 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 PBKQ96KB5 322 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 ARHGAP9Q9BRR9 750 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 KLHL25Q9H0H3 589 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 SLC25A18Q9H1K4 315 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 SOHLH2Q9NX45 425 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 OR6C2Q9NZP2 312 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 BFARQ9NZS9 450 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 POLG2Q9UHN1 485 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 PLAGL1Q9UM63 463 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 KCNMB2Q9Y691 235 aa10.24□□□□□ -0.77
SUPT4H1-204ENST00000580947 USP9YO00507 2555 aaPredicted RBP10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 PIPSLA2A3N6 862 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 TMEM150CB9EJG8 249 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 SUV39H1O43463 412 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 CREG1O75629 220 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 VAPBO95292 243 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 KRT14P02533 472 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 CTSBP07858 339 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 CCNYL3P0C7X3 344 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 SFTPCP11686 197 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 COILP38432 576 aaPredicted RBP10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 CCR10P46092 362 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 ARL4DP49703 201 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 VPS41P49754 854 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 CSE1LP55060 971 aaKnown RBP10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 NFKB2Q00653 900 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 HSPA14Q0VDF9 509 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 GPS1Q13098 491 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 IL10RAQ13651 578 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 KYNUQ16719 465 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 DEFB109BQ30KR1 87 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 SYTL3Q4VX76 610 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 IZUMO3Q5VZ72 239 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 KIAA0930Q6ICG6 404 aaPredicted RBP10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 UNC5DQ6UXZ4 953 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 DSELQ8IZU8 1212 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 SLC35F6Q8N357 371 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 C19orf47Q8N9M1 422 aaKnown RBP10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 LMNTD1Q8N9Z9 388 aa10.23□□□□□ -0.77
SUPT4H1-204ENST00000580947 MCUQ8NE86 351 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms