RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 KRT87PA6NCN2 255 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 C1QTNF9BB2RNN3 333 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 AGRPO00253 132 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 NUDT21O43809 227 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 NIPSNAP2O75323 286 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 C1QAP02745 245 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 RPLP0P05388 317 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 TPBGLP0DKB5 382 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 PLTPP55058 493 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 CSE1LP55060 971 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 PPP1CAP62136 330 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 TIAL1Q01085 375 aaKnown RBP eCLIP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 HHEXQ03014 270 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 PDIA2Q13087 525 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 ILKQ13418 452 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 LONRF1Q17RB8 773 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 AGAP9Q5VTM2 703 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 STEAP4Q687X5 459 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 ZNF470Q6ECI4 717 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 CAPRIN2Q6IMN6 1127 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 NEPROQ6NW34 567 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 C8orf74Q6P047 294 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 MAATS1Q7Z4T9 603 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 DCBLD1Q8N8Z6 715 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 FBXO36Q8NEA4 188 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 ACVR1CQ8NER5 493 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 KIF18AQ8NI77 898 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 HM13Q8TCT9 377 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 GATA6Q92908 595 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 ZNF514Q96K75 400 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 NUDT22Q9BRQ3 303 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 CCM2Q9BSQ5 444 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 FOXP3Q9BZS1 431 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 TGIF2Q9GZN2 237 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 LRRN3Q9H3W5 708 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 EPB41L5Q9HCM4 733 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 SLC40A1Q9NP59 571 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 SMYD2Q9NRG4 433 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 IARS2Q9NSE4 1012 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 C20orf96Q9NUD7 363 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 SAMD15Q9P1V8 674 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 CRYL1Q9Y2S2 319 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 NEUROG3Q9Y4Z2 214 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 PSAT1Q9Y617 370 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 LOC400499M0QZD8 3231 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 ASXL3Q9C0F0 2248 aa9.24□□□□□ -0.93
NPLOC4-219ENST00000576713 IGF2RP11717 2491 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 UBA6A0AVT1 1052 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 SLC5A10A0PJK1 596 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 MAGEB16A2A368 324 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 KIF2AO00139 706 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 PRMT5O14744 637 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 HAUS5O94927 633 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 AP2A2O94973 939 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 MT-CO3P00414 261 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 C1QTNF9P0C862 333 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 RALBP11234 206 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 XRCC1P18887 633 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 IDSP22304 550 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 ALDH4A1P30038 563 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 FMO4P31512 558 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 TTPAP49638 278 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 DUSP3P51452 185 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 EIF3BP55884 814 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 ARL4CP56559 192 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 GPX6P59796 221 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 GUCY2DQ02846 1103 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 BOP1Q14137 746 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 GPR18Q14330 331 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 AMZ1Q400G9 498 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 DNAJC21Q5F1R6 531 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 CNSTQ6PJW8 725 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 WASH2PQ6VEQ5 465 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 CERS6Q6ZMG9 384 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 CCNI2Q6ZMN8 369 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 BNC2Q6ZN30 1099 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 USP53Q70EK8 1073 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 KCNMB4Q86W47 210 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 SLITRK4Q8IW52 837 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 ZBED8Q8IZ13 594 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 PDIK1LQ8N165 341 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 OTUD6BQ8N6M0 293 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 LMNTD1Q8N9Z9 388 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 GOLM1Q8NBJ4 401 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 GIMAP7Q8NHV1 300 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 HEXDCQ8WVB3 486 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 NAT6Q93015 286 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 SEMA6CQ9H3T2 930 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 SYNDIG1Q9H7V2 258 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 SARS2Q9NP81 518 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 WASH6PQ9NQA3 447 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 IMP3Q9NV31 184 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 NCKIPSDQ9NZQ3 722 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 ZC3H7BQ9UGR2 993 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 RUVBL2Q9Y230 463 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 MSRB2Q9Y3D2 182 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 ENTPD2Q9Y5L3 495 aa9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 ARHGEF17Q96PE2 2063 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-219ENST00000576713 KMT2BQ9UMN6 2715 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms