RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 AQP12BA6NM10 295 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 MSH3P20585 1137 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 XPAP23025 273 aaPredicted RBP23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 JAK1P23458 1154 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 CHN2P52757 468 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 CTSCP53634 463 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 PSRC1Q6PGN9 363 aaPredicted RBP23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 TMC5Q6UXY8 1006 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 AQP12AQ8IXF9 295 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 ADGRG5Q8IZF4 528 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 RNF175Q8N4F7 328 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 ZNF557Q8N988 423 aaPredicted RBP23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 OTUB2Q96DC9 234 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 WRAP53Q9BUR4 548 aaKnown RBP23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 SLC2A11Q9BYW1 496 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 LRTM1Q9HBL6 345 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 ARMC1Q9NVT9 282 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 PDP2Q9P2J9 529 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 SLC22A14Q9Y267 594 aa23.1■■□□□ 1.29
NPLOC4-217ENST00000574897 TSPAN11A1L157 253 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 TULP3O75386 442 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 HLA-EP13747 358 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 GNPDA1P46926 289 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 SLC6A11P48066 632 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 GRM2Q14416 872 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 FAM109BQ6ICB4 259 aaPredicted RBP23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 ERMP1Q7Z2K6 904 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 DPP10Q8N608 796 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 LEMD2Q8NC56 503 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 HERVK_113Q902F9 699 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 EFHD1Q9BUP0 239 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 PIDD1Q9HB75 910 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 COQ6Q9Y2Z9 468 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 ANTXRLA6NF34 631 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 SAC3D1A6NKF1 404 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 PRRT4C9JH25 899 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 SLC28A1O00337 649 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 C8GP07360 202 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 FAM174BQ3ZCQ3 159 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 HID1Q8IV36 788 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 C7orf61Q8IZ16 206 aa23.09■■□□□ 1.29
NPLOC4-217ENST00000574897 GFYI3L273 518 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 KPNA3O00505 521 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 HIST1H2AGP0C0S8 130 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 PIM1P11309 404 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 HIST1H2ADP20671 130 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 HRH2P25021 359 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 SLC6A12P48065 614 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 PREPP48147 710 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 DCDC1P59894 354 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 CYP51A1Q16850 503 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 SPANXN4Q5MJ08 99 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 PLEKHS1Q5SXH7 462 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 TECPR1Q7Z6L1 1165 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 HIST1H2AHQ96KK5 128 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 HIST1H2AJQ99878 128 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 H2AFJQ9BTM1 129 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 EIF3LQ9Y262 564 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 TCRBV5S2A0A599 114 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 EIF3FO00303 357 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 PLK4O00444 970 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 SOCS2O14508 198 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 TSPAN6O43657 245 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 DFNA5O60443 496 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 MT-ND1P03886 318 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 ENO2P09104 434 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 MMP12P39900 470 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 ABRQ12979 859 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 NAIF1Q69YI7 327 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 LIPIQ6XZB0 460 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 DNAJC14Q6Y2X3 702 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 DPPA4Q7L190 304 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 RTL10Q7L3V2 364 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 PTRH1Q86Y79 214 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 TRAM1L1Q8N609 369 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 CELF5Q8N6W0 485 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 RASGEF1AQ8N9B8 481 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 SMG7Q92540 1137 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 TRIM15Q9C019 465 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 RPF2Q9H7B2 306 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 VAPAQ9P0L0 249 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 DLGAP4Q9Y2H0 992 aa23.08■■□□□ 1.29
NPLOC4-217ENST00000574897 KIAA1549LQ6ZVL6 1849 aa23.08■■□□□ 1.28
NPLOC4-217ENST00000574897 KIF26AQ9ULI4 1882 aaPredicted RBP23.08■■□□□ 1.28
NPLOC4-217ENST00000574897 MPC1LP0DKB6 136 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 EEFSECP57772 596 aaKnown RBP23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 PRKCQQ04759 706 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 INPP5AQ14642 412 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 ACOX1Q15067 660 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 CCSMST1Q4G0I0 132 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 METTL2BQ6P1Q9 378 aaKnown RBP23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 DDHD1Q8NEL9 900 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 SELENOMQ8WWX9 145 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 CGREF1Q99674 301 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 KCNE1BA0A087WTH5 132 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 CFAP99D6REC4 459 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 ARNTLO00327 626 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 SLC9A3R1O14745 358 aaPredicted RBP23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 ELFN1P0C7U0 828 aa23.07■■□□□ 1.28
NPLOC4-217ENST00000574897 TCF3P15923 654 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms