RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 RPS18P62269 152 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 RPS15P62841 145 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 ABRQ12979 859 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 GPS1Q13098 491 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 TMED2Q15363 201 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 TPSAB1Q15661 275 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 PRAMEF17Q5VTA0 474 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 LRRC8BQ6P9F7 803 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 SPESP1Q6UW49 350 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 TRIM73Q86UV7 250 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 PTRH1Q86Y79 214 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 GSDMBQ8TAX9 411 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 SKA2Q8WVK7 121 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 ASZ1Q8WWH4 475 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 CPT1BQ92523 772 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 SGSM3Q96HU1 749 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 RUFY1Q96T51 708 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 CARD6Q9BX69 1037 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 ACTL8Q9H568 366 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 CIDEBQ9UHD4 219 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 SERTAD3Q9UJW9 196 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 SNX12Q9UMY4 172 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
NPLOC4-213ENST00000573519 C21orf140B9A014 251 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 GOLGA8KD6RF30 607 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 GOLGA8TH3BQL2 631 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 PRMT5O14744 637 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 AVILO75366 819 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 VAPBO95292 243 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 FURINP09958 794 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 UGT2B7P16662 529 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 EIF3BP55884 814 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 GNG11P61952 73 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 SARNPP82979 210 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 GPS2Q13227 327 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 CRTC2Q53ET0 693 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 DNAJC21Q5F1R6 531 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 ANKRD22Q5VYY1 191 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 CASC4Q6P4E1 433 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 CDHR3Q6ZTQ4 885 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 TMEM135Q86UB9 458 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 VRK3Q8IV63 474 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 SLC22A15Q8IZD6 547 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 SLC38A9Q8NBW4 561 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 C9orf43Q8TAL5 461 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 ACTRT1Q8TDG2 376 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 NAP1L3Q99457 506 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 TRIM4Q9C037 500 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 ACTR5Q9H9F9 607 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 SYTL2Q9HCH5 934 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 ZNF71Q9NQZ8 489 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 LATS2Q9NRM7 1088 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 TREX1Q9NSU2 369 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 SPHK1Q9NYA1 384 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 GNPTGQ9UJJ9 305 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 POLHQ9Y253 713 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 PCDHGA6Q9Y5G7 932 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 BAHCC1Q9P281 2608 aa12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 GCN1Q92616 2671 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-213ENST00000573519 E7EQ34 232 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 RPN2P04844 631 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 TPBGLP0DKB5 382 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 PTPN4P29074 926 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 ITGA1P56199 1179 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 CDK16Q00536 496 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 KCNJ11Q14654 390 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 CYP1B1Q16678 543 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 DEFB110Q30KQ9 67 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 MRNIPQ6NTE8 343 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 CCDC137Q6PK04 289 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 GPR135Q8IZ08 494 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 C2orf73Q8N5S3 287 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 C19orf47Q8N9M1 422 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 PANX3Q96QZ0 392 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 OR2A14Q96R47 310 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 KIFC1Q9BW19 673 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 GPR87Q9BY21 358 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 CHST8Q9H2A9 424 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 IRAK4Q9NWZ3 460 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 OR6C2Q9NZP2 312 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 SAMD15Q9P1V8 674 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 TSR3Q9UJK0 312 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 SOX13Q9UN79 622 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 CDYLQ9Y232 598 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 FARSAQ9Y285 508 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 MAN2B2Q9Y2E5 1009 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 KCNMB2Q9Y691 235 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 CFAP46Q8IYW2 2715 aa12.28□□□□□ -0.44
NPLOC4-213ENST00000573519 A0A0J9YY10 115 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 MEN1O00255 615 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 PFDN6O15212 129 aa12.27□□□□□ -0.45
NPLOC4-213ENST00000573519 PHF2O75151 1096 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms