RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 NBEAQ8NFP9 2946 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 IGSF10Q6WRI0 2623 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 IGLV3-16A0A075B6K0 115 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 TRBV5-4A0A0C4DH59 114 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 HEATR9A2RTY3 570 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 MROH6A6NGR9 719 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 KIF1CO43896 1103 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 RAD1O60671 282 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 RASSF9O75901 435 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 SUN1O94901 812 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 SLC35G4P0C7Q5 338 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 PRSS56P0CW18 603 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 MTHFD1P11586 935 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 EPHA1P21709 976 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 ADRA1DP25100 572 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 PSMA3P25788 255 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 ACRV1P26436 265 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 MAP4P27816 1152 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 RPL22P35268 128 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 GRIA1P42261 906 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 LEPRP48357 1165 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 PRLHRP49683 370 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 CCZ1BP86790 482 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 CCZ1P86791 482 aaPredicted RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 FOXM1Q08050 763 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 C19orf57Q0VDD7 668 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 SRSF6Q13247 344 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 LAMB3Q13751 1172 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 MPP2Q14168 576 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 PLCL1Q15111 1095 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 CCDC38Q502W7 563 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 CACHD1Q5VU97 1274 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 KIAA1614Q5VZ46 1190 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 CAPRIN2Q6IMN6 1127 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 IRGCQ6NXR0 463 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 ZNF449Q6P9G9 518 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 DRICH1Q6PGQ1 229 aaPredicted RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 PCSK4Q6UW60 755 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 PPP1R21Q6ZMI0 780 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 FAM92BQ6ZTR7 304 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 VASH2Q86V25 355 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 WFDC8Q8IUA0 241 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 CACNA2D3Q8IZS8 1091 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 LILRA3Q8N6C8 439 aaPredicted RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 CLDN19Q8N6F1 224 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 CCDC89Q8N998 374 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 GPR150Q8NGU9 434 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 HM13Q8TCT9 377 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 KLHL6Q8WZ60 621 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 RSC1A1Q92681 617 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 FERD3LQ96RJ6 166 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 TLR10Q9BXR5 811 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 APMAPQ9HDC9 416 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 HRASLS2Q9NWW9 162 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 SMARCAL1Q9NZC9 954 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 PAK5Q9P286 719 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 PILRAQ9UKJ1 303 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 ZKSCAN5Q9Y2L8 839 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 PPP2R2CQ9Y2T4 447 aa7.25□□□□□ -1.25
NUP88-205ENST00000572809 CFAP20Q9Y6A4 193 aaKnown RBP7.25□□□□□ -1.25
NUP88-205ENST00000572809 UBA6A0AVT1 1052 aaPredicted RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 CCDC78A2IDD5 438 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 CCDC162PA2VCL2 907 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 LINC01387J3KSC0 135 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 CEP104O60308 925 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 STK17BO94768 372 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 AP2A2O94973 939 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 BPNT1O95861 308 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 FGGP02679 453 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 PRB1P04280 392 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 APRTP07741 180 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 ZSCAN5DPP0CG00 497 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 NELFEP18615 380 aaKnown RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 MSNP26038 577 aaKnown RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 NDUFS1P28331 727 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 CXCR5P32302 372 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 NSG1P42857 185 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 CAPZBP47756 277 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 SEMA5AQ13591 1074 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 LY6DQ14210 128 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 ITIH4Q14624 930 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 IL11RAQ14626 422 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 LYPLAL1Q5VWZ2 237 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 C4orf22Q6V702 233 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 BNC2Q6ZN30 1099 aaPredicted RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 MICALCLQ6ZW33 695 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 NLRP9Q7RTR0 991 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 GSTA5Q7RTV2 222 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 TIPARPQ7Z3E1 657 aaKnown RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 PRSS42Q7Z5A4 293 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 PIANPQ8IYJ0 282 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 NLGN4XQ8N0W4 816 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 GLIS1Q8NBF1 620 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 NLGN4YQ8NFZ3 816 aaPredicted RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 OR4E2Q8NGC2 313 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 HDAC10Q969S8 669 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 OR6C1Q96RD1 312 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 RANBP9Q96S59 729 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 TTC1Q99614 292 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms